cassava15946.m1 (Manihot esculenta)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 cassava15946.m1 T196009_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.862 0.944
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.857 0.917
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.857 0.917
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.857 0.917
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.851 0.889
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.851 0.889
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.843 0.833
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.843 0.833
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.842 0.889
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.842 0.889
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.842 0.889
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.833 0.778
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.832 0.778
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.832 0.778
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.819 0.778
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.819 0.778
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.819 0.778
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.819 0.750
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava15946.m1 GATA 220 255

Links

Other GATA family TFs
Other Manihot esculenta TFs

614 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL003097 Aedes aegypti AAEL003097 N
AALB004109 Anopheles albimanus AALB004109 N
Aan_R005984 Calypte anna Aan_R005984 N
AARA007796 Anopheles arabiensis AARA007796 N
AATE013496 Anopheles atroparvus AATE013496 N
ACEP21389 Atta cephalotes ACEP21389 N
ACHR000042 Anopheles christyi ACHR000042 N
ACOM025306 Anopheles coluzzii ACOM025306 N
ACUA024194 Anopheles culicifacies ACUA024194 N
ACYPI47146 Acyrthosiphon pisum ACYPI47146 N
ADAC004139 Anopheles darlingi ADAC004139 N
ADIR008028 Anopheles dirus ADIR008028 N
AEPI000476 Anopheles epiroticus AEPI000476 N
AFAF008223 Anopheles farauti AFAF008223 N
Afo_R003276 Aptenodytes forsteri Afo_R003276 N
AFUN008052 Anopheles funestus AFUN008052 N
AGAP007133 Anopheles gambiae AGAP007133 N
Alligator_sinensis_CCG015084.1 Alligator sinensis Alligator_sinensis_CCG015084.1 N
AMAM009687 Anopheles maculatus AMAM009687 N
AMEC009276 Anopheles melas AMEC009276 N
AMEM004763 Anopheles merus AMEM004763 N
AMIN011274 Anopheles minimus AMIN011274 N
AQUA002064 Anopheles quadriannulatus AQUA002064 N
ASTEI06908 Anopheles stephensi ASTEI06908 N
CapteG124203 Capitella teleta CapteG124203 N
CGI_10022084 Crassostrea gigas CGI_10022084 N
CPIJ003689 Culex quinquefasciatus CPIJ003689 N
CpipJ_CPIJ003689 Culex pipiens CpipJ_CPIJ003689 N
DAPPUDRAFT_312030 Daphnia pulex DAPPUDRAFT_312030 N
ENSAMEG00000006258 Ailuropoda melanoleuca ENSAMEG00000006258 N
ENSAMXG00000003636 Astyanax mexicanus ENSAMXG00000003636 N
ENSAMXG00000013350 Astyanax mexicanus ENSAMXG00000013350 N
ENSAMXG00000020082 Astyanax mexicanus ENSAMXG00000020082 N
CAMTA2 Bos taurus ENSBTAG00000008591 N
ENSBTAP00000011330-D1 Bos grunniens ENSBTAP00000011330-D1 N
CAMTA2 Canis familiaris ENSCAFG00000015674 N
CAMTA1 Canis familiaris ENSCAFG00000019650 N
ENSCING00000024278 Ciona intestinalis ENSCING00000024278 N
CAMTA2 Callithrix jacchus ENSCJAG00000011609 N
CAMTA2 Cavia porcellus ENSCPOG00000007319 N
CAMTA1 Cavia porcellus ENSCPOG00000014759 N
ENSCSAG00000012903 Chlorocebus sabaeus ENSCSAG00000012903 N
camta1b Danio rerio ENSDARG00000007824 N
camta1a Danio rerio ENSDARG00000077428 N
camta2 Danio rerio ENSDARG00000092799 N
CAMTA2 Dasypus novemcinctus ENSDNOG00000036357 N
Camta1 Dipodomys ordii ENSDORG00000003017 N
Camta2 Dipodomys ordii ENSDORG00000011763 N
CAMTA2 Equus caballus ENSECAG00000019370 N
CAMTA1 Equus caballus ENSECAG00000020792 N
CAMTA1 Echinops telfairi ENSETEG00000006373 N
CAMTA2 Echinops telfairi ENSETEG00000009033 N
ENSFALG00000009834 Ficedula albicollis ENSFALG00000009834 N
CAMTA2 Felis catus ENSFCAG00000008698 N
ENSFCAG00000022960 Felis catus ENSFCAG00000022960 N
CAMTA2 Homo sapiens ENSG00000108509 N
CAMTA1 Homo sapiens ENSG00000171735 N
ENSGACG00000001106 Gasterosteus aculeatus ENSGACG00000001106 N
camta1b Gasterosteus aculeatus ENSGACG00000007914 N
ENSGALG00000000610 Gallus gallus ENSGALG00000000610 N
CAMTA1 Gorilla gorilla ENSGGOG00000003577 N
CAMTA2 Gorilla gorilla ENSGGOG00000009188 N
ENSGMOG00000017650 Gadus morhua ENSGMOG00000017650 N
ENSGMOG00000019408 Gadus morhua ENSGMOG00000019408 N
ENSLACG00000014089 Latimeria chalumnae ENSLACG00000014089 N
ENSLACG00000014574 Latimeria chalumnae ENSLACG00000014574 N
CAMTA2 Loxodonta africana ENSLAFG00000012042 N
ENSLOCG00000013712 Lepisosteus oculatus ENSLOCG00000013712 N
ENSMEUG00000007952 Macropus eugenii ENSMEUG00000007952 N
CAMTA2 Microcebus murinus ENSMICG00000012537 N
CAMTA2 Myotis lucifugus ENSMLUG00000014019 N
CAMTA2 Macaca mulatta ENSMMUG00000009176 N
CAMTA2 Monodelphis domestica ENSMODG00000005219 N
ENSMODG00000005842 Monodelphis domestica ENSMODG00000005842 N
ENSMPUG00000006733 Mustela putorius furo ENSMPUG00000006733 N
ENSMPUG00000011010 Mustela putorius furo ENSMPUG00000011010 N
Camta1 Mus musculus ENSMUSG00000014592 N
Camta2 Mus musculus ENSMUSG00000040712 N
ENSNLEG00000008706 Nomascus leucogenys ENSNLEG00000008706 N
ENSNLEG00000017452 Nomascus leucogenys ENSNLEG00000017452 N
ENSOANG00000030450 Ornithorhynchus anatinus ENSOANG00000030450 N
ENSOARG00000004897 Ovis aries ENSOARG00000004897 N
CAMTA2 Oryctolagus cuniculus ENSOCUG00000001109 N
CAMTA1 Otolemur garnettii ENSOGAG00000009792 N
CAMTA2 Otolemur garnettii ENSOGAG00000014734 N
ENSONIG00000004505 Oreochromis niloticus ENSONIG00000004505 N
ENSONIG00000019368 Oreochromis niloticus ENSONIG00000019368 N
CAMTA1 Ochotona princeps ENSOPRG00000015968 N
camta1b Oryzias latipes ENSORLG00000016337 N
ENSP00000306522-D1 Bos grunniens ENSP00000306522-D1 N
ENSP00000321813 Macaca fascicularis ENSP00000321813 N
ENSPANG00000024316 Papio anubis ENSPANG00000024316 N
ENSPFOG00000000859 Poecilia formosa ENSPFOG00000000859 N
ENSPFOG00000004225 Poecilia formosa ENSPFOG00000004225 N
ENSPFOG00000016244 Poecilia formosa ENSPFOG00000016244 N
ENSPPYG00000001932 Pongo abelii ENSPPYG00000001932 N
ENSPPYG00000007853 Pongo abelii ENSPPYG00000007853 N
ENSPSIG00000004616 Pelodiscus sinensis ENSPSIG00000004616 N
CAMTA1 Pan troglodytes ENSPTRG00000000096 N
CAMTA2 Pan troglodytes ENSPTRG00000023129 N
CAMTA2 Pteropus vampyrus ENSPVAG00000003768 N
CAMTA1 Pteropus vampyrus ENSPVAG00000005390 N
Camta2 Rattus norvegicus ENSRNOG00000004283 N
Camta1 Rattus norvegicus ENSRNOG00000018602 N
CAMTA2 Sorex araneus ENSSARG00000004137 N
ENSSHAG00000006160 Sarcophilus harrisii ENSSHAG00000006160 N
CAMTA2 Sus scrofa ENSSSCG00000017902 N
ENSSTOG00000003897 Ictidomys tridecemlineatus ENSSTOG00000003897 N
ENSSTOG00000011183 Ictidomys tridecemlineatus ENSSTOG00000011183 N
CAMTA1 Tupaia belangeri ENSTBEG00000001406 N
CAMTA2 Tupaia belangeri ENSTBEG00000003130 N
CAMTA1 Taeniopygia guttata ENSTGUG00000002566 N
ENSTNIG00000001909 Tetraodon nigroviridis ENSTNIG00000001909 N
ENSTNIG00000003621 Tetraodon nigroviridis ENSTNIG00000003621 N
ENSTNIG00000012546 Tetraodon nigroviridis ENSTNIG00000012546 N
ENSTRUG00000000888 Takifugu rubripes ENSTRUG00000000888 N
camta1b Takifugu rubripes ENSTRUG00000010941 N
camta1a Takifugu rubripes ENSTRUG00000013622 N
ENSTSYG00000007714 Tarsius syrichta ENSTSYG00000007714 N
CAMTA2 Tursiops truncatus ENSTTRG00000001303 N
CAMTA1 Tursiops truncatus ENSTTRG00000010366 N
ENSXMAG00000001955 Xiphophorus maculatus ENSXMAG00000001955 N
ENSXMAG00000018742 Xiphophorus maculatus ENSXMAG00000018742 N
e_gw.96.31.1 Branchiostoma floridae e_gw.96.31.1 N
GD10658 Drosophila simulans FBgn0182425 N
Camta Drosophila melanogaster FBgn0259234 N
GA30460 Drosophila pseudoobscura FBgn0264597 N
fgenesh2_pg.scaffold_96000095 Branchiostoma floridae fgenesh2_pg.scaffold_96000095 N
Gfo_R002636 Geospiza fortis Gfo_R002636 N
HCOI01623300 Haemonchus contortus HCOI01623300 N
HCOI02168400 Haemonchus contortus HCOI02168400 N
Hsal_08954--XP_001120489.1_APIME Harpegnathos saltator Hsal_08954--XP_001120489.1_APIME N
ISCW018640 Ixodes scapularis ISCW018640 N
ISCW018642 Ixodes scapularis ISCW018642 N
KGM_18441 Danaus plexippus KGM_18441 N
L798_01998 Zootermopsis nevadensis L798_01998 N
LCUP001199 Lucilia cuprina LCUP001199 N
MDOA011429 Musca domestica MDOA011429 N
Myotis_brandtii_CAMTA2_10007480 Myotis brandtii Myotis_brandtii_CAMTA2_10007480 N
nRc.2.0.1.g38701 Romanomermis culicivorax nRc.2.0.1.g38701 N
Ocbimv22002350m.g Octopus bimaculoides Ocbimv22002350m.g N
Ogr01933 Ophisaurus gracilis Ogr01933 N
PHUM466620 Pediculus humanus PHUM466620 N
PPAI004941 Phlebotomus papatasi PPAI004941 N
Pvit_07906 Pogona vitticeps Pvit_07906 N
RPRC011455 Rhodnius prolixus RPRC011455 N
Sakowv30004245m.g Saccoglossus kowalevskii Sakowv30004245m.g N
SMAR001697 Strigamia maritima SMAR001697 N
TC012001 Tribolium castaneum TC012001 N
TRE_0000641901 Trichobilharzia regenti TRE_0000641901 N
camta2 Xenopus tropicalis XB-GENE-1033052 N
XP_002933905 Xenopus tropicalis XP_002933905 N
YQE_00136 Dendroctonus ponderosae YQE_00136 N