Cucsa.252730 (Cucumis sativus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Cucsa.252730 T196058_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.842 0.917
GATA15
M01997_2.00 		Arabidopsis thaliana
NNHGATCNN
NNGATCDNN		 PBM
Weirauch et al.(2014)
pTH7662 		0.822 0.917
GATA15
M06886_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
GATA15_col_b 		0.822 0.917
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.252730.1 GATA 38 73

Links

Other GATA family TFs
Other Cucumis sativus TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_09292 Capronia coronata A1O1_09292 N
A1O3_04668 Capronia epimyces A1O3_04668 N
A1O5_10885 Cladophialophora psammophila A1O5_10885 N
A1O7_09090 Cladophialophora yegresii A1O7_09090 N
HMPREF1120_01469 Exophiala dermatitidis HMPREF1120_01469 N
PV04_09680 Capronia semiimmersa PV04_09680 N
PV06_10613 Exophiala oligosperma PV06_10613 N
PV07_00036 Cladophialophora immunda PV07_00036 N
PV08_02169 Exophiala spinifera PV08_02169 N
PV10_04737 Exophiala mesophila PV10_04737 N
Z517_01937 Fonsecaea pedrosoi Z517_01937 N
Z519_11424 Cladophialophora bantiana Z519_11424 N