CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1Plus.C_60454
(
Mycosphaerella fijiensis
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
estExt_Genewise1Plus.C_60454
T196178_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-1
M01236_2.00
Neurospora crassa
MCGATCGM
KCGATCGK
PBM
Lambert et al.(2019)
pTH9706
0.839
0.882
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_60454
GATA
657
690
CANCHTRVTPEWRRGPSGQRDLCNSCGLRWAKLV
Links
Other
GATA
family TFs
Other
Mycosphaerella fijiensis
TFs
124 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARB_00534
Arthroderma benhamiae
ARB_00534
N
ACLA_080760
Aspergillus clavatus
CADACLAG00007520
N
CADAFLAG00003024
Aspergillus flavus
CADAFLAG00003024
N
AFUA_7G00130
Aspergillus fumigatus
CADAFUAG00001186
N
CADANGAG00009059
Aspergillus niger
CADANGAG00009059
N
CADAORAG00000829
Aspergillus oryzae
CADAORAG00000829
N
NFIA_112260
Neosartorya fischeri
CADNFIAG00010688
N
EURHEDRAFT_409592
Aspergillus ruber
EURHEDRAFT_409592
N
e_gw1.00118.121.1
Aspergillus carbonarius
e_gw1.00118.121.1
N
H102_00219
Trichophyton rubrum
H102_00219
N
H105_00213
Trichophyton soudanense
H105_00213
N
MCYG_03602
Arthroderma otae
MCYG_03602
N
MCYG_03602
Microsporum canis
MCYG_03602
N
MGYG_06592
Microsporum gypseum
MGYG_06592
N
OIDMADRAFT_65474
Oidiodendron maius
OIDMADRAFT_65474
N
PDE_08862
Penicillium oxalicum
PDE_08862
N
PFICI_13552
Pestalotiopsis fici
PFICI_13552
N
TEQG_05350
Trichophyton equinum
TEQG_05350
N
TESG_06706
Trichophyton tonsurans
TESG_06706
N
TRV_00390
Trichophyton verrucosum
TRV_00390
N