CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_scaffold_3000005
(
Phanerochaete chrysosporium
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
fgenesh1_pg.C_scaffold_3000005
T196203_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_3000005
GATA
153
189
CYNCRTTDTSTWRRSSLTPGKVLCNKCGLFERTHSRP
Links
Other
GATA
family TFs
Other
Phanerochaete chrysosporium
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm5793
Brugia malayi
Bm5793
N
BTMF_0000803501
Brugia timori
BTMF_0000803501
N
DME_0000750701
Dracunculus medinensis
DME_0000750701
N
EEL_0000365701
Elaeophora elaphi
EEL_0000365701
N
GPUH_0000193501
Gongylonema pulchrum
GPUH_0000193501
N
GPUH_0002177401
Gongylonema pulchrum
GPUH_0002177401
N
LOAG_12129
Loa loa
LOAG_12129
N
nAv.1.0.1.g10349
Acanthocheilonema viteae
nAv.1.0.1.g10349
N
nDi.2.2.2.g00452
Dirofilaria immitis
nDi.2.2.2.g00452
N
nOo.2.0.1.g10267
Onchocerca ochengi
nOo.2.0.1.g10267
N
OFLC_0000273301
Onchocerca flexuosa
OFLC_0000273301
N
WBGene00247290
Onchocerca volvulus
WBGene00247290
N