Bostr.28625s0006 (Boechera stricta)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Bostr.28625s0006 T196401_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.823 0.778
GATA15
M01997_2.00 		Arabidopsis thaliana
NNHGATCNN
NNGATCDNN		 PBM
Weirauch et al.(2014)
pTH7662 		0.803 0.778
GATA15
M06886_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
GATA15_col_b 		0.803 0.778
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.28625s0006.1.p GATA 43 78

Links

Other GATA family TFs
Other Boechera stricta TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O5_08857 Cladophialophora psammophila A1O5_08857 I 0.000
ACRE_033680 Acremonium chrysogenum ACRE_033680 I 0.000
BBA_08083 Beauveria bassiana BBA_08083 I 0.000
CCM_01116 Cordyceps militaris CCM_01116 I 0.000
CFIO01_07294 Colletotrichum fioriniae CFIO01_07294 N 0.000
CGGC5_8357 Colletotrichum gloeosporioides CGGC5_8357 I 0.000
CH063_06329 Colletotrichum higginsianum CH063_06329 I 0.000
Cob_01730 Colletotrichum orbiculare Cob_01730 N 0.000
CPUR_03208 Claviceps purpurea CPUR_03208 I 0.000
CSUB01_10562 Colletotrichum sublineola CSUB01_10562 N 0.000
FFUJ_01501 Fusarium fujikuroi FFUJ_01501 I 0.000
FGRRES_01307 Fusarium graminearum FGRRES_01307 I 0.000
FOXG_00080 Fusarium oxysporum FOXG_00080 I 0.000
FPSE_01403 Fusarium pseudograminearum FPSE_01403 I 0.000
FVEG_01436 Fusarium verticillioides FVEG_01436 I 0.000
GLRG_03872 Colletotrichum graminicola GLRG_03872 N 0.000
GMDG_01119 Pseudogymnoascus destructans GMDG_01119 I 0.000
HMPREF1541_08750 Cyphellophora europaea HMPREF1541_08750 N 0.000
LEMA_P050050.1 Leptosphaeria maculans LEMA_P050050.1 I 0.000
MAM_03651 Metarhizium album MAM_03651 I 0.000
MYCTH_2088766 Myceliophthora thermophila MYCTH_2088766 N 0.000
PFICI_01954 Pestalotiopsis fici PFICI_01954 N 0.000
PV06_10058 Exophiala oligosperma PV06_10058 I 0.000
SNOG_15057 Phaeosphaeria nodorum SNOG_15057 I 0.000
SNOG_15057 Stagonospora nodorum SNOG_15057 I 0.000
THITE_2113068 Thielavia terrestris THITE_2113068 I 0.000
TRIATDRAFT_148632 Trichoderma atroviride TRIATDRAFT_148632 I 0.000
TRIREDRAFT_58130 Trichoderma reesei TRIREDRAFT_58130 I 0.000
TRIVIDRAFT_173998 Trichoderma virens TRIVIDRAFT_173998 I 0.000
V499_08351 Pseudogymnoascus pannorum V499_08351 I 0.000
VDAG_08823 Verticillium dahliae VDAG_08823 N 0.000
VDBG_05122 Verticillium albo atrum VDBG_05122 N 0.000
VDBG_05122 Verticillium alfalfae VDBG_05122 N 0.000
VHEMI02386 Torrubiella hemipterigena VHEMI02386 I 0.000
W97_00703 Coniosporium apollinis W97_00703 I 0.000
Z519_03796 Cladophialophora bantiana Z519_03796 I 0.000