Cagra.3356s0048 (Capsella grandiflora)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Cagra.3356s0048 T196433_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA26
M02001_2.00 		Arabidopsis thaliana
NNKATBNNNN
NNNNVATMNN		 PBM
Weirauch et al.(2014)
pTH7490 		0.867 1.000
GATA27
M02005_2.00 		Arabidopsis thaliana
NNGATBNNN
NNNVATCNN		 PBM
Weirauch et al.(2014)
pTH7492 		0.867 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.3356s0048.1.p GATA 7 42

Links

Other GATA family TFs
Other Capsella grandiflora TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZFP30 Callithrix jacchus ENSCJAG00000009479 N 0.000
ZFP30 Cavia porcellus ENSCPOG00000007951 N 0.000
ENSCSAG00000004151 Chlorocebus sabaeus ENSCSAG00000004151 N 0.000
ZFP30 Dasypus novemcinctus ENSDNOG00000032824 N 0.000
ENSDORG00000001378 Dipodomys ordii ENSDORG00000001378 N 0.000
ZFP30 Equus caballus ENSECAG00000017215 N 0.000
ZFP30 Homo sapiens ENSG00000120784 N 0.000
ZFP30 Gorilla gorilla ENSGGOG00000016654 N 0.000
ZFP30 Loxodonta africana ENSLAFG00000004782 N 0.000
ZFP30 Myotis lucifugus ENSMLUG00000012181 N 0.000
ENSMMUG00000001933 Macaca mulatta ENSMMUG00000001933 N 0.000
ENSMMUP00000002578 Macaca fascicularis ENSMMUP00000002578 N 0.000
Zfp30 Mus musculus ENSMUSG00000047473 N 0.000
ENSNLEG00000016977 Nomascus leucogenys ENSNLEG00000016977 N 0.000
ZFP30 Oryctolagus cuniculus ENSOCUG00000010157 N 0.000
ENSPANG00000019660 Papio anubis ENSPANG00000019660 N 0.000
ENSPPYG00000009918 Pongo abelii ENSPPYG00000009918 N 0.000
ZFP30 Pan troglodytes ENSPTRG00000010914 N 0.000
ZFP30 Pteropus vampyrus ENSPVAG00000006214 N 0.000
Zfp30 Rattus norvegicus ENSRNOG00000055519 N 0.000
ZFP30 Sorex araneus ENSSARG00000000413 N 0.000
ZFP30 Sus scrofa ENSSSCG00000029408 N 0.000
ENSSTOG00000005694 Ictidomys tridecemlineatus ENSSTOG00000005694 N 0.000
ENSTSYG00000010884 Tarsius syrichta ENSTSYG00000010884 N 0.000
ZFP30 Vicugna pacos ENSVPAG00000010720 N 0.000
Myotis_brandtii_ZFP30_10005467 Myotis brandtii Myotis_brandtii_ZFP30_10005467 N 0.000