Carubv10007115m.g (Capsella rubella)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Carubv10007115m.g T196452_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA26
M02001_2.00 		Arabidopsis thaliana
NNKATBNNNN
NNNNVATMNN		 PBM
Weirauch et al.(2014)
pTH7490 		0.867 1.000
GATA27
M02005_2.00 		Arabidopsis thaliana
NNGATBNNN
NNNVATCNN		 PBM
Weirauch et al.(2014)
pTH7492 		0.867 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10007115m GATA 7 42

Links

Other GATA family TFs
Other Capsella rubella TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action