Ciclev10022856m.g (Citrus clementina)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Ciclev10022856m.g T196491_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.810 0.694
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10022856m GATA 29 64
Ciclev10022923m GATA 17 52

Links

Other GATA family TFs
Other Citrus clementina TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R005612 Calypte anna Aan_R005612 I 0.000
Alligator_sinensis_CCG000741.1 Alligator sinensis Alligator_sinensis_CCG000741.1 N 0.000
Cmyd_10003867 Chelonia mydas Cmyd_10003867 N 0.000
ENSAMEG00000003228 Ailuropoda melanoleuca ENSAMEG00000003228 I 0.000
ENSAPLG00000016341 Anas platyrhynchos ENSAPLG00000016341 N 0.000
IKZF4 Bos taurus ENSBTAG00000012636 I 0.000
IKZF4 Canis familiaris ENSCAFG00000030801 I 0.000
IKZF4 Callithrix jacchus ENSCJAG00000006230 I 0.000
IKZF4 Cavia porcellus ENSCPOG00000009964 I 0.000
ENSCSAG00000005270 Chlorocebus sabaeus ENSCSAG00000005270 I 0.000
IKZF4 Dasypus novemcinctus ENSDNOG00000037824 I 0.000
Ikzf4 Dipodomys ordii ENSDORG00000015397 I 0.000
IKZF4 Equus caballus ENSECAG00000024175 I 0.000
IKZF4 Erinaceus europaeus ENSEEUG00000006871 I 0.000
IKZF4 Felis catus ENSFCAG00000029852 I 0.000
IKZF4 Homo sapiens ENSG00000123411 I 0.000
IKZF4 Gorilla gorilla ENSGGOG00000011558 I 0.000
IKZF4 Loxodonta africana ENSLAFG00000026742 I 0.000
ENSMGAG00000010066 Meleagris gallopavo ENSMGAG00000010066 I 0.000
IKZF4 Microcebus murinus ENSMICG00000011029 I 0.000
IKZF4 Myotis lucifugus ENSMLUG00000026014 I 0.000
IKZF4 Macaca mulatta ENSMMUG00000007523 I 0.000
IKZF4 Monodelphis domestica ENSMODG00000001780 N 0.000
ENSMPUG00000000964 Mustela putorius furo ENSMPUG00000000964 I 0.000
Ikzf4 Mus musculus ENSMUSG00000002578 I 0.000
ENSNLEG00000017564 Nomascus leucogenys ENSNLEG00000017564 I 0.000
ENSOARG00000010565 Ovis aries ENSOARG00000010565 I 0.000
IKZF4 Oryctolagus cuniculus ENSOCUG00000012558 I 0.000
IKZF4 Otolemur garnettii ENSOGAG00000034375 I 0.000
IKZF4 Ochotona princeps ENSOPRG00000007904 I 0.000
ENSP00000262032 Macaca fascicularis ENSP00000262032 I 0.000
ENSP00000262032-D1 Bos grunniens ENSP00000262032-D1 I 0.000
IKZF4 Procavia capensis ENSPCAG00000010641 I 0.000
ENSPPYG00000004641 Pongo abelii ENSPPYG00000004641 I 0.000
ENSPSIG00000003074 Pelodiscus sinensis ENSPSIG00000003074 N 0.000
IKZF4 Pan troglodytes ENSPTRG00000005074 I 0.000
IKZF4 Pteropus vampyrus ENSPVAG00000007558 I 0.000
Ikzf4 Rattus norvegicus ENSRNOG00000005535 I 0.000
ENSSHAG00000007337 Sarcophilus harrisii ENSSHAG00000007337 N 0.000
ENSSTOG00000010547 Ictidomys tridecemlineatus ENSSTOG00000010547 I 0.000
ENSXMAG00000001993 Xiphophorus maculatus ENSXMAG00000001993 N 0.000
Myotis_brandtii_IKZF4_10009162 Myotis brandtii Myotis_brandtii_IKZF4_10009162 I 0.000
Ogr17485 Ophisaurus gracilis Ogr17485 N 0.000
Pvit_00621 Pogona vitticeps Pvit_00621 N 0.000
ikzf4 Xenopus tropicalis XB-GENE-1219102 N 0.000