evm.TU.supercontig_941.1 (Carica papaya)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 evm.TU.supercontig_941.1 T196559_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.867 1.000
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.867 1.000
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.851 0.917
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.847 0.889
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.847 0.889
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.847 0.889
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.843 0.806
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.843 0.806
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.837 0.861
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.837 0.861
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.837 0.861
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.833 0.778
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.832 0.806
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.832 0.806
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.830 0.778
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.819 0.806
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.819 0.806
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.819 0.806
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_941.1 GATA 149 184

Links

Other GATA family TFs
Other Carica papaya TFs

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Brh_R001567 Buceros rhinoceros Brh_R001567 I
Cmyd_10017008 Chelonia mydas Cmyd_10017008 I
IKZF5 Anolis carolinensis ENSACAG00000017468 I
ENSAMEG00000004665 Ailuropoda melanoleuca ENSAMEG00000004665 I
ENSAPLG00000015301 Anas platyrhynchos ENSAPLG00000015301 I
IKZF5 Bos taurus ENSBTAG00000023847 I
ENSBTAP00000032681-D1 Bos grunniens ENSBTAP00000032681-D1 I
IKZF5 Canis familiaris ENSCAFG00000030765 I
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ENSCPOG00000021914 Cavia porcellus ENSCPOG00000021914 I
ENSCPOG00000025133 Cavia porcellus ENSCPOG00000025133 I
ENSCSAG00000004558 Chlorocebus sabaeus ENSCSAG00000004558 I
ikzf5 Danio rerio ENSDARG00000056491 I
IKZF5 Dasypus novemcinctus ENSDNOG00000011974 I
ENSDORG00000011805 Dipodomys ordii ENSDORG00000011805 I
IKZF5 Equus caballus ENSECAG00000006987 I
ENSETEG00000002138 Echinops telfairi ENSETEG00000002138 I
ENSETEG00000004201 Echinops telfairi ENSETEG00000004201 I
ENSETEG00000017021 Echinops telfairi ENSETEG00000017021 I
ENSFALG00000004728 Ficedula albicollis ENSFALG00000004728 I
IKZF5 Felis catus ENSFCAG00000009589 I
IKZF5 Homo sapiens ENSG00000095574 I
ikzf5 Gasterosteus aculeatus ENSGACG00000009720 I
ENSGALG00000026700 Gallus gallus ENSGALG00000026700 I
IKZF5 Gorilla gorilla ENSGGOG00000003823 I
ENSLACG00000006175 Latimeria chalumnae ENSLACG00000006175 I
IKZF5 Loxodonta africana ENSLAFG00000012381 I
ENSLOCG00000008225 Lepisosteus oculatus ENSLOCG00000008225 I
IKZF5 Meleagris gallopavo ENSMGAG00000011599 I
ENSMICG00000000457 Microcebus murinus ENSMICG00000000457 I
IKZF5 Myotis lucifugus ENSMLUG00000009538 I
IKZF5 Macaca mulatta ENSMMUG00000023480 I
ENSMODG00000007802 Monodelphis domestica ENSMODG00000007802 I
ENSMPUG00000002786 Mustela putorius furo ENSMPUG00000002786 I
Ikzf5 Mus musculus ENSMUSG00000040167 D
ENSNLEG00000027055 Nomascus leucogenys ENSNLEG00000027055 I
IKZF5 Ornithorhynchus anatinus ENSOANG00000001994 I
ENSOARG00000009064 Ovis aries ENSOARG00000009064 I
IKZF5 Oryctolagus cuniculus ENSOCUG00000013340 I
IKZF5 Otolemur garnettii ENSOGAG00000032070 I
ENSONIG00000016036 Oreochromis niloticus ENSONIG00000016036 I
IKZF5 Ochotona princeps ENSOPRG00000014214 I
ENSP00000357881 Macaca fascicularis ENSP00000357881 I
ENSPANG00000020471 Papio anubis ENSPANG00000020471 I
IKZF5 Procavia capensis ENSPCAG00000012387 I
ENSPPYG00000002727 Pongo abelii ENSPPYG00000002727 I
ENSPSIG00000008029 Pelodiscus sinensis ENSPSIG00000008029 I
IKZF5 Pan troglodytes ENSPTRG00000003019 I
IKZF5 Pteropus vampyrus ENSPVAG00000016435 I
Ikzf5 Rattus norvegicus ENSRNOG00000025651 I
ENSSHAG00000011508 Sarcophilus harrisii ENSSHAG00000011508 I
IKZF5 Sus scrofa ENSSSCG00000023565 I
ENSSTOG00000028669 Ictidomys tridecemlineatus ENSSTOG00000028669 I
IKZF5 Tupaia belangeri ENSTBEG00000004379 I
ENSTGUG00000011361 Taeniopygia guttata ENSTGUG00000011361 I
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ENSTSYG00000003383 Tarsius syrichta ENSTSYG00000003383 I
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Myotis_brandtii_IKZF5_10011368 Myotis brandtii Myotis_brandtii_IKZF5_10011368 I
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Pvit_17596 Pogona vitticeps Pvit_17596 I
Tal_R009868 Tyto alba Tal_R009868 I
ikzf5 Xenopus tropicalis XB-GENE-978531 I
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