Gorai.011G072500 (Gossypium raimondii)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 Gorai.011G072500 T196618_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.862 0.944
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.862 0.944
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.851 0.944
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.847 0.917
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.847 0.917
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.847 0.917
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.843 0.806
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.843 0.806
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.842 0.889
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.842 0.889
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.842 0.889
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.833 0.778
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.832 0.806
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.832 0.806
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.830 0.778
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.819 0.778
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.819 0.778
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.819 0.778
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.011G072500.1 GATA 215 250

Links

Other GATA family TFs
Other Gossypium raimondii TFs

612 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000001827 Ailuropoda melanoleuca ENSAMEG00000001827 N
ENSAMXG00000005025 Astyanax mexicanus ENSAMXG00000005025 N
TCF23 Bos taurus ENSBTAG00000014813 N
TCF23 Canis familiaris ENSCAFG00000030192 N
TCF23 Callithrix jacchus ENSCJAG00000001198 N
ENSCPOG00000003785 Cavia porcellus ENSCPOG00000003785 N
Tcf23 Dipodomys ordii ENSDORG00000014403 N
TCF23 Equus caballus ENSECAG00000021374 N
ENSGACG00000004183 Gasterosteus aculeatus ENSGACG00000004183 N
ENSGMOG00000003557 Gadus morhua ENSGMOG00000003557 N
TCF23 Loxodonta africana ENSLAFG00000014587 N
ENSLOCG00000015901 Lepisosteus oculatus ENSLOCG00000015901 N
TCF23 Monodelphis domestica ENSMODG00000015714 N
TCF23 Ornithorhynchus anatinus ENSOANG00000003936 N
ENSOARG00000019168 Ovis aries ENSOARG00000019168 N
ENSOCUG00000008655 Oryctolagus cuniculus ENSOCUG00000008655 N
ENSONIG00000011423 Oreochromis niloticus ENSONIG00000011423 N
ENSOPRG00000010556 Ochotona princeps ENSOPRG00000010556 N
ENSP00000296096-D1 Bos grunniens ENSP00000296096-D1 N
ENSPVAG00000015152 Pteropus vampyrus ENSPVAG00000015152 N
ENSSHAG00000012462 Sarcophilus harrisii ENSSHAG00000012462 N
TCF23 Sus scrofa ENSSSCG00000027409 N
ENSSTOG00000015523 Ictidomys tridecemlineatus ENSSTOG00000015523 N
TCF23 Tursiops truncatus ENSTTRG00000005255 N
ENSXMAG00000008880 Xiphophorus maculatus ENSXMAG00000008880 N