11320_YIR013C (Saccharomyces paradoxus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 11320_YIR013C T196995_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GAT4
M00050_2.00 		Saccharomyces cerevisiae
NNAGATCTMN
NKAGATCTNN		 PBM
Badis et al.(2008)
GAT4_4527 		0.867 1.000
GAT4
M01547_2.00 		Saccharomyces cerevisiae
NNNRWWYNNN
NNNRWWYNNN		 PBM
Zhu et al.(2009)
Gat4 		0.867 1.000
GAT4
M07479_2.00 		Saccharomyces cerevisiae
NNAGATCYNNN
NNNRGATCTNN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0302.1 		0.867 1.000
GAT4
M08561_2.00 		Saccharomyces cerevisiae
NNAGATCYNNN
NNNRGATCTNN		 Misc
DeBoer et al.(2011)
YIR013C_565 		0.867 1.000
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
11320_YIR013C GATA 53 89

Links

Other GATA family TFs
Other Saccharomyces paradoxus TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A_02757 Schistosoma haematobium A_02757 N
csin111833 Clonorchis sinensis csin111833 N
D915_08997 Fasciola hepatica D915_08997 N
DILT_0001782101 Diphyllobothrium latum DILT_0001782101 N
ECANG7_00876 Echinococcus canadensis ECANG7_00876 N
EmuJ_000596600 Echinococcus multilocularis EmuJ_000596600 N
HmN_000083600 Hymenolepis microstoma HmN_000083600 N
HNAJ_0001108601 Hymenolepis nana HNAJ_0001108601 N
MCOS_0000608501 Mesocestoides corti MCOS_0000608501 N
SCUD_0000712901 Schistosoma curassoni SCUD_0000712901 N
Sjc_0034430 Schistosoma japonicum Sjc_0034430 N
Smp_015840 Schistosoma mansoni Smp_015840 N
SMRZ_0000566901 Schistosoma margrebowiei SMRZ_0000566901 N
SROB_0001916001 Schistosoma rodhaini SROB_0001916001 N
SSLN_0000095401 Schistocephalus solidus SSLN_0000095401 N
T265_06698 Opisthorchis viverrini T265_06698 N
TsM_000623000 Taenia solium TsM_000623000 N
TTAC_0000117301 Hydatigera taeniaeformis TTAC_0000117301 N