22393_YLR013W (Saccharomyces mikatae)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 22393_YLR013W T197013_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GAT4
M00050_2.00 		Saccharomyces cerevisiae
NNAGATCTMN
NKAGATCTNN		 PBM
Badis et al.(2008)
GAT4_4527 		0.836 0.722
GAT4
M01547_2.00 		Saccharomyces cerevisiae
NNNRWWYNNN
NNNRWWYNNN		 PBM
Zhu et al.(2009)
Gat4 		0.836 0.722
GAT4
M07479_2.00 		Saccharomyces cerevisiae
NNAGATCYNNN
NNNRGATCTNN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0302.1 		0.836 0.722
GAT4
M08561_2.00 		Saccharomyces cerevisiae
NNAGATCYNNN
NNNRGATCTNN		 Misc
DeBoer et al.(2011)
YIR013C_565 		0.836 0.722
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
22393_YLR013W GATA 69 105

Links

Other GATA family TFs
Other Saccharomyces mikatae TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYCFIDRAFT_43729 Pseudocercospora fijiensis MYCFIDRAFT_43729 N