2489_YCR018C (Saccharomyces paradoxus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 2489_YCR018C T197016_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SRD1
M00047_2.00 		Saccharomyces cerevisiae
RGATCTMC
GKAGATCY		 PBM
Badis et al.(2008)
SRD1_2031 		0.836 0.944
SRD1
M01544_2.00 		Saccharomyces cerevisiae
NBAGWTYNN
NNRAWCTVN		 PBM
Zhu et al.(2009)
Srd1 		0.836 0.944
SRD1
M07476_2.00 		Saccharomyces cerevisiae
RGATCTVN
NBAGATCY		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0389.1 		0.836 0.944
SRD1
M08558_2.00 		Saccharomyces cerevisiae
RGATCTMN
NKAGATCY		 Misc
DeBoer et al.(2011)
YCR018C_530 		0.836 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
2489_YCR018C GATA 168 203

Links

Other GATA family TFs
Other Saccharomyces paradoxus TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R015460 Calypte anna Aan_R015460 I
Afo_R001782 Aptenodytes forsteri Afo_R001782 I
Brh_R011668 Buceros rhinoceros Brh_R011668 I
PLAG1 Anolis carolinensis ENSACAG00000017994 I
ENSAMEG00000006089 Ailuropoda melanoleuca ENSAMEG00000006089 I
ENSAPLG00000007090 Anas platyrhynchos ENSAPLG00000007090 I
PLAG1 Bos taurus ENSBTAG00000004022 I
PLAG1 Canis familiaris ENSCAFG00000007051 I
PLAG1 Choloepus hoffmanni ENSCHOG00000010218 I
PLAG1 Callithrix jacchus ENSCJAG00000016621 I
ENSCPOG00000008740 Cavia porcellus ENSCPOG00000008740 I
ENSCSAG00000014574 Chlorocebus sabaeus ENSCSAG00000014574 I
Plag1 Dipodomys ordii ENSDORG00000011524 I
PLAG1 Equus caballus ENSECAG00000010773 I
PLAG1 Erinaceus europaeus ENSEEUG00000013472 I
ENSFALG00000010290 Ficedula albicollis ENSFALG00000010290 I
PLAG1 Felis catus ENSFCAG00000014980 I
PLAG1 Homo sapiens ENSG00000181690 D
PLAG1 Gallus gallus ENSGALG00000015407 I
PLAG1 Gorilla gorilla ENSGGOG00000026661 I
ENSLACG00000002568 Latimeria chalumnae ENSLACG00000002568 I
PLAG1 Loxodonta africana ENSLAFG00000013617 I
PLAG1 Meleagris gallopavo ENSMGAG00000011002 I
PLAG1 Myotis lucifugus ENSMLUG00000022542 I
ENSMMUG00000007346 Macaca mulatta ENSMMUG00000007346 I
ENSMPUG00000010446 Mustela putorius furo ENSMPUG00000010446 I
Plag1 Mus musculus ENSMUSG00000003282 I
ENSNLEG00000001218 Nomascus leucogenys ENSNLEG00000001218 I
ENSOANG00000005503 Ornithorhynchus anatinus ENSOANG00000005503 I
ENSOARG00000014951 Ovis aries ENSOARG00000014951 I
PLAG1 Oryctolagus cuniculus ENSOCUG00000006001 I
PLAG1 Otolemur garnettii ENSOGAG00000025403 I
ENSONIG00000009655 Oreochromis niloticus ENSONIG00000009655 I
plag1 Oryzias latipes ENSORLG00000019433 I
ENSP00000325546-D1 Bos grunniens ENSP00000325546-D1 I
ENSP00000416537 Macaca fascicularis ENSP00000416537 I
ENSPANG00000009705 Papio anubis ENSPANG00000009705 I
PLAG1 Procavia capensis ENSPCAG00000014102 I
ENSPPYG00000018602 Pongo abelii ENSPPYG00000018602 I
ENSPSIG00000017823 Pelodiscus sinensis ENSPSIG00000017823 I
PLAG1 Pan troglodytes ENSPTRG00000020266 I
Plag1 Rattus norvegicus ENSRNOG00000008846 I
ENSSHAG00000010371 Sarcophilus harrisii ENSSHAG00000010371 I
PLAG1 Sus scrofa ENSSSCG00000006247 I
ENSSTOG00000002716 Ictidomys tridecemlineatus ENSSTOG00000002716 I
PLAG1 Tupaia belangeri ENSTBEG00000013496 I
PLAG1 Taeniopygia guttata ENSTGUG00000011100 I
ENSTSYG00000013443 Tarsius syrichta ENSTSYG00000013443 I
PLAG1 Tursiops truncatus ENSTTRG00000016849 I
PLAG1 Vicugna pacos ENSVPAG00000010729 I
Gfo_R012674 Geospiza fortis Gfo_R012674 I
Myotis_brandtii_PLAG1_10024665 Myotis brandtii Myotis_brandtii_PLAG1_10024665 I
Pvit_07170 Pogona vitticeps Pvit_07170 I
plag1 Xenopus tropicalis XB-GENE-868443 I