chr4.CM0283.270.nd (Lotus japonicus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 chr4.CM0283.270.nd T197038_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.867 1.000
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.867 1.000
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.825 0.944
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.825 0.944
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr4.CM0283.270.nd GATA 126 161

Links

Other GATA family TFs
Other Lotus japonicus TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_05481 Capronia coronata A1O1_05481 I 0.000
A1O3_09080 Capronia epimyces A1O3_09080 I 0.000
A1O5_02846 Cladophialophora psammophila A1O5_02846 I 0.000
A1O7_06866 Cladophialophora yegresii A1O7_06866 I 0.000
A1O9_01300 Exophiala aquamarina A1O9_01300 I 0.000
AB08968.1 Alternaria brassicicola AB08968.1 I 0.000
BAUCODRAFT_23289 Baudoinia compniacensis BAUCODRAFT_23289 I 0.000
BDDG_07931 Blastomyces dermatitidis BDDG_07931 I 0.000
BOTBODRAFT_93074 Botryobasidium botryosum BOTBODRAFT_93074 N 0.000
AFUA_2G02540 Aspergillus fumigatus CADAFUAG00003598 I 0.000
CADANGAG00005877 Aspergillus niger CADANGAG00005877 I 0.000
ANIA_04562 Aspergillus nidulans CADANIAG00005876 D 0.000
ATEG_06925 Aspergillus terreus CADATEAG00003197 I 0.000
COCC4DRAFT_125759 Bipolaris maydis COCC4DRAFT_125759 I 0.000
COCCADRAFT_29461 Bipolaris zeicola COCCADRAFT_29461 I 0.000
COCMIDRAFT_108054 Bipolaris oryzae COCMIDRAFT_108054 I 0.000
COCSADRAFT_86485 Bipolaris sorokiniana COCSADRAFT_86485 I 0.000
COCVIDRAFT_20419 Bipolaris victoriae COCVIDRAFT_20419 I 0.000
COCVIDRAFT_30018 Bipolaris victoriae COCVIDRAFT_30018 I 0.000
DOTSEDRAFT_48303 Dothistroma septosporum DOTSEDRAFT_48303 I 0.000
estExt_Genewise1.C_20182 Mycosphaerella fijiensis estExt_Genewise1.C_20182 I 0.000
estExt_Genewise1Plus.C_40021 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_40021 I 0.000
e_gw1.00771.352.1 Aspergillus carbonarius e_gw1.00771.352.1 I 0.000
e_gw1.13.356.1 Mycosphaerella graminicola e_gw1.13.356.1 I 0.000
fgeneshMC_pg.5_#_704 Mucor circinelloides fgeneshMC_pg.5_#_704 I 0.000
G647_03229 Cladophialophora carrionii G647_03229 I 0.000
GLOINDRAFT_44500 Rhizophagus irregularis GLOINDRAFT_44500 I 0.000
GSTUM_00002563001 Tuber melanosporum GSTUM_00002563001 I 0.000
gw1.4.1798.1 Mucor circinelloides gw1.4.1798.1 I 0.000
H072_3382 Dactylellina haptotyla H072_3382 I 0.000
HMPREF1541_10554 Cyphellophora europaea HMPREF1541_10554 I 0.000
LEMA_P113690.1 Leptosphaeria maculans LEMA_P113690.1 I 0.000
M408DRAFT_34303 Serendipita vermifera M408DRAFT_34303 N 0.000
M422DRAFT_84080 Sphaerobolus stellatus M422DRAFT_84080 N 0.000
M7I_2756 Glarea lozoyensis M7I_2756 I 0.000
MBM_06265 Marssonina brunnea MBM_06265 I 0.000
MYCFIDRAFT_49331 Pseudocercospora fijiensis MYCFIDRAFT_49331 I 0.000
Mycgr3G51498 Zymoseptoria tritici Mycgr3G51498 I 0.000
NCAS_0A05020 Naumovozyma castellii NCAS_0A05020 N 0.000
PDE_05394 Penicillium oxalicum PDE_05394 I 0.000
PIIN_04121 Piriformospora indica PIIN_04121 N 0.000
PMAA_045020 Penicillium marneffei PMAA_045020 I 0.000
PMAA_045020 Talaromyces marneffei PMAA_045020 I 0.000
PTRG_07150 Pyrenophora triticirepentis PTRG_07150 I 0.000
PTT_08596 Pyrenophora teres PTT_08596 I 0.000
PV04_07297 Capronia semiimmersa PV04_07297 I 0.000
PV05_09803 Exophiala xenobiotica PV05_09803 I 0.000
PV06_05518 Exophiala oligosperma PV06_05518 I 0.000
PV07_10932 Cladophialophora immunda PV07_10932 I 0.000
PV08_01459 Exophiala spinifera PV08_01459 I 0.000
PV10_06310 Exophiala mesophila PV10_06310 I 0.000
PV11_09617 Exophiala sideris PV11_09617 I 0.000
PVAR5_0698 Byssochlamys spectabilis PVAR5_0698 I 0.000
RO3G_09518 Rhizopus oryzae RO3G_09518 I 0.000
RO3G_13320 Rhizopus oryzae RO3G_13320 I 0.000
Scas_Contig668.25 Saccharomyces castellii Scas_Contig668.25 N 0.000
SETTUDRAFT_111603 Setosphaeria turcica SETTUDRAFT_111603 I 0.000
SNOG_00166 Phaeosphaeria nodorum SNOG_00166 I 0.000
SNOG_00166 Stagonospora nodorum SNOG_00166 I 0.000
TSTA_034220 Talaromyces stipitatus TSTA_034220 I 0.000
UCRNP2_115 Neofusicoccum parvum UCRNP2_115 I 0.000
V565_015180 Rhizoctonia solani V565_015180 N 0.000
Z517_09948 Fonsecaea pedrosoi Z517_09948 I 0.000
Z518_09068 Rhinocladiella mackenziei Z518_09068 I 0.000
Z519_07376 Cladophialophora bantiana Z519_07376 I 0.000