CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pc22g02540
(
Penicillium chrysogenum
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
Pc22g02540
T197211_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-2
M02016_2.00
Neurospora crassa
NNHGATNNN
NNNATCDNN
PBM
Weirauch et al.(2014)
pTH8611
0.851
0.889
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pc22g02540.t1
GATA
353
388
CSDCGTADSPEWRKGPNGPKTLCNACGLRWSKKEKK
Links
Other
GATA
family TFs
Other
Penicillium chrysogenum
TFs
146 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF165
Callithrix jacchus
ENSCJAG00000018687
N
0.000
ZNF165
Equus caballus
ENSECAG00000006698
N
0.000
ENSMPUG00000001314
Mustela putorius furo
ENSMPUG00000001314
N
0.000
ZNF165
Sus scrofa
ENSSSCG00000001197
N
0.000
ZNF165
Tupaia belangeri
ENSTBEG00000004768
N
0.000
ENSTSYG00000000669
Tarsius syrichta
ENSTSYG00000000669
N
0.000
Myotis_brandtii_ZNF165_10002340
Myotis brandtii
Myotis_brandtii_ZNF165_10002340
N
0.000