CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI01886300
(
Haemonchus contortus
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
HCOI01886300
T197526_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG13549
M01231_2.00
Caenorhabditis briggsae
NTGATAAN
NTTATCAN
PBM
Lambert et al.(2019)
pTH11492
0.853
0.914
elt-6
M00666_2.00
Caenorhabditis elegans
NTGATAAN
NTTATCAN
PBM
Narasimhan et al.(2015)
pTH10707
0.838
0.857
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI01886300.t1
GATA
46
80
CSNCMTTKTTAWRRDMAGKLVCNACGLYFRLHRTH
Links
Other
GATA
family TFs
Other
Haemonchus contortus
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCDUO_22736
Ancylostoma duodenale
ANCDUO_22736
N
CJA18173
Caenorhabditis japonica
CJA18173
I
NECAME_09892
Necator americanus
NECAME_09892
N
OESDEN_00257
Oesophagostomum dentatum
OESDEN_00257
N
SVUK_0001101901
Strongylus vulgaris
SVUK_0001101901
N
WUBG_15572
Wuchereria bancrofti
WUBG_15572
N