CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g02423
(
Litomosoides sigmodontis
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
nLs.2.1.2.g02423
T197703_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t02423-RA
GATA
269
304
CHHCYTSKSKDWHHSGRERQLLCTECRIFYKKYGQL
Links
Other
GATA
family TFs
Other
Litomosoides sigmodontis
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB07245.1
Alternaria brassicicola
AB07245.1
N
COCC4DRAFT_31944
Bipolaris maydis
COCC4DRAFT_31944
N
COCCADRAFT_31195
Bipolaris zeicola
COCCADRAFT_31195
N
COCMIDRAFT_87950
Bipolaris oryzae
COCMIDRAFT_87950
N
COCSADRAFT_90297
Bipolaris sorokiniana
COCSADRAFT_90297
N
estExt_fgenesh1_kg.C_90015
Cochliobolus heterostrophus C5
estExt_fgenesh1_kg.C_90015
N