CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCSAG00000007158
(
Chlorocebus sabaeus
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04516 (CP2)
IPR007604
ENSCSAG00000007158
T198946_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GRHL1
M03071_2.00
Homo sapiens
RACYKGWHNDWCMGGTT
AACCKGWHNDWCMRGTY
SELEX
Jolma et al.(2013)
GRHL1_1
0.981
0.981
GRHL1
M03072_2.00
Homo sapiens
DAACCGGTTH
DAACCGGTTH
SELEX
Jolma et al.(2013)
GRHL1_2
0.981
0.981
GRHL1
M03073_2.00
Homo sapiens
HWAACCGGTTTD
HAAACCGGTTWD
SELEX
Jolma et al.(2013)
GRHL1_3
0.981
0.981
GRHL1
M04887_2.00
Homo sapiens
DAACCGGTTH
DAACCGGTTH
SELEX
Yin et al.(2017)
GRHL1_eDBD_HT-SELEX
0.981
0.981
GRHL1
M04888_2.00
Homo sapiens
DAACMKGTTH
DAACMKGTTH
SELEX
Yin et al.(2017)
GRHL1_eDBD_Methyl-HT-SELEX
0.981
0.981
GRHL2
M08129_2.00
Homo sapiens
NNNAACTGGTTTNNN
NNNAAACCAGTTNNN
ChIP-seq
Mathelier et al.(2014)
MA1105.1
0.742
0.742
GRHL2
M09125_2.00
Homo sapiens
AACYDGYYBDDC
GHHVRRCHRGTT
Misc
Kulakovskiy et al.(2013)
GRHL2_HUMAN.H11MO.0.A
0.742
0.742
Grhl2
M09126_2.00
Mus musculus
RDCCDGTYYKDC
GHMRRACHGGHY
Misc
Kulakovskiy et al.(2013)
GRHL2_MOUSE.H11MO.0.A
0.742
0.742
GRHL2
M09558_2.00
Homo sapiens
NRAACHDGHHDDDCHDGTTY
RAACHDGHHHDDCHDGTTYN
Misc
Heinz et al.(2010)
HBE-GRHL2_GSE46194
0.742
0.742
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCSAP00000003434
Grainyhead
230
442
LSLRMPGMNSEDYVFDSVSGNNFEYTLEASKSLRQKPGDSTMTYLNKGQFYPITLKEVSSNEGIHHPISKVRSVIMVVFAEDKSREDQLRHWKYWHSRQHTAKQRCIDIADYKESFNTISNIEEIAYNAISFTWDINDEAKVFISVNCLSTDFSSQKGVKGLPLNIQIDTYSYNNRSNKPVHRAYCQIKVFCDKGAERKIRDEERKQSKRKGK
Links
Other
Grainyhead
family TFs
Other
Chlorocebus sabaeus
TFs
114 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action