grhl1 (Danio rerio)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSDARG00000061391 T198955_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRHL1
M03071_2.00 		Homo sapiens
RACYKGWHNDWCMGGTT
AACCKGWHNDWCMRGTY		 SELEX
Jolma et al.(2013)
GRHL1_1 		0.923 0.923
GRHL1
M03072_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Jolma et al.(2013)
GRHL1_2 		0.923 0.923
GRHL1
M03073_2.00 		Homo sapiens
HWAACCGGTTTD
HAAACCGGTTWD		 SELEX
Jolma et al.(2013)
GRHL1_3 		0.923 0.923
GRHL1
M04887_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_HT-SELEX 		0.923 0.923
GRHL1
M04888_2.00 		Homo sapiens
DAACMKGTTH
DAACMKGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_Methyl-HT-SELEX 		0.923 0.923
GRHL2
M08129_2.00 		Homo sapiens
NNNAACTGGTTTNNN
NNNAAACCAGTTNNN		 ChIP-seq
Mathelier et al.(2014)
MA1105.1 		0.901 0.901
GRHL2
M09125_2.00 		Homo sapiens
AACYDGYYBDDC
GHHVRRCHRGTT		 Misc
Kulakovskiy et al.(2013)
GRHL2_HUMAN.H11MO.0.A 		0.901 0.901
Grhl2
M09126_2.00 		Mus musculus
RDCCDGTYYKDC
GHMRRACHGGHY		 Misc
Kulakovskiy et al.(2013)
GRHL2_MOUSE.H11MO.0.A 		0.901 0.901
GRHL2
M09558_2.00 		Homo sapiens
NRAACHDGHHDDDCHDGTTY
RAACHDGHHHDDCHDGTTYN		 Misc
Heinz et al.(2010)
HBE-GRHL2_GSE46194 		0.901 0.901
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000123737 Grainyhead 1 91
ENSDARP00000124180 Grainyhead 220 432
ENSDARP00000124914 Grainyhead 220 432

Links

Other Grainyhead family TFs
Other Danio rerio TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANIA_01518 Aspergillus nidulans CADANIAG00008146 D 0.000
CFIO01_08941 Colletotrichum fioriniae CFIO01_08941 N 0.000
CGGC5_834 Colletotrichum gloeosporioides CGGC5_834 N 0.000
CH063_07902 Colletotrichum higginsianum CH063_07902 N 0.000
Cob_04241 Colletotrichum orbiculare Cob_04241 N 0.000
e_gw1.6.920.1 Nectria haematococca e_gw1.6.920.1 I 0.000
FGRRES_07198 Fusarium graminearum FGRRES_07198 D 0.000
FOXG_01595 Fusarium oxysporum FOXG_01595 I 0.000
FPSE_03183 Fusarium pseudograminearum FPSE_03183 I 0.000
FVEG_07955 Fusarium verticillioides FVEG_07955 I 0.000
GLRG_04974 Colletotrichum graminicola GLRG_04974 I 0.000
HMPREF1120_07579 Exophiala dermatitidis HMPREF1120_07579 I 0.000
NechaG49195 Fusarium solani NechaG49195 I 0.000
OIDMADRAFT_130335 Oidiodendron maius OIDMADRAFT_130335 N 0.000
PFICI_11013 Pestalotiopsis fici PFICI_11013 N 0.000
PV04_09950 Capronia semiimmersa PV04_09950 I 0.000
S40285_05512 Stachybotrys chlorohalonata S40285_05512 I 0.000
SBOR_7563 Sclerotinia borealis SBOR_7563 N 0.000
TRIATDRAFT_233204 Trichoderma atroviride TRIATDRAFT_233204 I 0.000
TRIREDRAFT_53877 Trichoderma reesei TRIREDRAFT_53877 I 0.000
TRIVIDRAFT_188169 Trichoderma virens TRIVIDRAFT_188169 I 0.000