grhl1 (Tetraodon nigroviridis)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSTNIG00000017317 T199268_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRHL1
M03071_2.00 		Homo sapiens
RACYKGWHNDWCMGGTT
AACCKGWHNDWCMRGTY		 SELEX
Jolma et al.(2013)
GRHL1_1 		0.775 0.775
GRHL1
M03072_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Jolma et al.(2013)
GRHL1_2 		0.775 0.775
GRHL1
M03073_2.00 		Homo sapiens
HWAACCGGTTTD
HAAACCGGTTWD		 SELEX
Jolma et al.(2013)
GRHL1_3 		0.775 0.775
GRHL1
M04887_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_HT-SELEX 		0.775 0.775
GRHL1
M04888_2.00 		Homo sapiens
DAACMKGTTH
DAACMKGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_Methyl-HT-SELEX 		0.775 0.775
GRHL2
M08129_2.00 		Homo sapiens
NNNAACTGGTTTNNN
NNNAAACCAGTTNNN		 ChIP-seq
Mathelier et al.(2014)
MA1105.1 		0.757 0.757
GRHL2
M09125_2.00 		Homo sapiens
AACYDGYYBDDC
GHHVRRCHRGTT		 Misc
Kulakovskiy et al.(2013)
GRHL2_HUMAN.H11MO.0.A 		0.757 0.757
GRHL2
M09558_2.00 		Homo sapiens
NRAACHDGHHDDDCHDGTTY
RAACHDGHHHDDCHDGTTYN		 Misc
Heinz et al.(2010)
HBE-GRHL2_GSE46194 		0.757 0.757
Grhl2
M09126_2.00 		Mus musculus
RDCCDGTYYKDC
GHMRRACHGGHY		 Misc
Kulakovskiy et al.(2013)
GRHL2_MOUSE.H11MO.0.A 		0.752 0.752
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000020455 Grainyhead 220 437

Links

Other Grainyhead family TFs
Other Tetraodon nigroviridis TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_206080 Agaricus bisporus AGABI2DRAFT_206080 N
CC1G_14832 Coprinopsis cinerea CC1G_14832 N
CERSUDRAFT_93268 Ceriporiopsis subvermispora CERSUDRAFT_93268 N
CY34DRAFT_808438 Suillus luteus CY34DRAFT_808438 N
fgenesh1_pg.C_scaffold_3000282 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_3000282 N
FIBRA_08530 Fibroporia radiculosa FIBRA_08530 N
FOMPIDRAFT_99099 Fomitopsis pinicola FOMPIDRAFT_99099 N
GALMADRAFT_240824 Galerina marginata GALMADRAFT_240824 N
GLOTRDRAFT_138211 Gloeophyllum trabeum GLOTRDRAFT_138211 N
GYMLUDRAFT_244445 Gymnopus luxurians GYMLUDRAFT_244445 N
HETIRDRAFT_478421 Heterobasidion irregulare HETIRDRAFT_478421 N
JAAARDRAFT_66557 Jaapia argillacea JAAARDRAFT_66557 N
K443DRAFT_672061 Laccaria amethystina K443DRAFT_672061 N
LACBIDRAFT_305525 Laccaria bicolor LACBIDRAFT_305525 N
M378DRAFT_8120 Amanita muscaria M378DRAFT_8120 N
M404DRAFT_882883 Pisolithus tinctorius M404DRAFT_882883 N
M413DRAFT_442898 Hebeloma cylindrosporum M413DRAFT_442898 N
Moror_14084 Moniliophthora roreri Moror_14084 N
MPER_01314 Moniliophthora perniciosa MPER_01314 N
PAXRUDRAFT_832240 Paxillus rubicundulus PAXRUDRAFT_832240 N
PHACADRAFT_32832 Phanerochaete carnosa PHACADRAFT_32832 N
PHLGIDRAFT_66452 Phlebiopsis gigantea PHLGIDRAFT_66452 N
PILCRDRAFT_819897 Piloderma croceum PILCRDRAFT_819897 N
POSPLDRAFT_95924 Postia placenta POSPLDRAFT_95924 N
POSPLDRAFT_96456 Postia placenta POSPLDRAFT_96456 N
SCHCODRAFT_245859 Schizophyllum commune SCHCODRAFT_245859 N
SCLCIDRAFT_1214941 Scleroderma citrinum SCLCIDRAFT_1214941 N
SERLA73DRAFT_162624 Serpula lacrymans SERLA73DRAFT_162624 N