CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG010998.1
(
Alligator sinensis
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04516 (CP2)
IPR007604
Alligator_sinensis_CCG010998.1
T199501_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG010998.1
Grainyhead
247
466
ESLLFSDILKTQPDPPCSESYPADSIKSDFEYTLGSPKAIHVKSGDSPMAYLNKGQFYPITLRTAGDGKCLHLSSNKVKSVVMIVFDNEKIPLEQLKFWKHWHSRQPTAKQRVIDVADCKENFNTVQNIEEVAYNALSFMWNINEEAKVFIGVNCLSTDFSSQKGVKGVPLNLQIDTYDCSSGTSRLVHRAVCQIKIFCDKGAERKMRDDERKQFRRKGK
Links
Other
Grainyhead
family TFs
Other
Alligator sinensis
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R005902
Calypte anna
Aan_R005902
N
0.914
Afo_R008962
Aptenodytes forsteri
Afo_R008962
N
0.923
Brh_R012570
Buceros rhinoceros
Brh_R012570
N
0.923
Cmyd_10004499
Chelonia mydas
Cmyd_10004499
N
0.809
GRHL3
Anolis carolinensis
ENSACAG00000017262
N
0.859
ENSAMEG00000009982
Ailuropoda melanoleuca
ENSAMEG00000009982
N
0.866
ENSAPLG00000003161
Anas platyrhynchos
ENSAPLG00000003161
N
0.923
GRHL3
Bos taurus
ENSBTAG00000019791
N
0.800
ENSBTAP00000026370-D1
Bos grunniens
ENSBTAP00000026370-D1
N
0.800
GRHL3
Canis familiaris
ENSCAFG00000012994
N
0.848
GRHL3
Choloepus hoffmanni
ENSCHOG00000000305
N
0.839
GRHL3
Callithrix jacchus
ENSCJAG00000020858
N
0.840
GRHL3
Cavia porcellus
ENSCPOG00000008841
N
0.852
ENSCSAG00000000939
Chlorocebus sabaeus
ENSCSAG00000000939
N
0.809
grhl1
Danio rerio
ENSDARG00000061391
I
0.714
GRHL3
Dasypus novemcinctus
ENSDNOG00000013939
N
0.834
Grhl3
Dipodomys ordii
ENSDORG00000001381
N
0.814
GRHL3
Equus caballus
ENSECAG00000009866
N
0.795
GRHL3
Echinops telfairi
ENSETEG00000001594
N
0.827
ENSFALG00000000490
Ficedula albicollis
ENSFALG00000000490
N
0.922
GRHL3
Felis catus
ENSFCAG00000019048
N
0.870
GRHL3
Homo sapiens
ENSG00000158055
N
0.839
GRHL3
Gallus gallus
ENSGALG00000004249
N
0.923
GRHL3
Gorilla gorilla
ENSGGOG00000001792
N
0.839
ENSGMOG00000002256
Gadus morhua
ENSGMOG00000002256
N
0.706
GRHL3
Loxodonta africana
ENSLAFG00000001618
N
0.853
ENSMEUG00000004978
Macropus eugenii
ENSMEUG00000004978
N
0.800
GRHL3
Meleagris gallopavo
ENSMGAG00000005903
N
0.910
GRHL3
Microcebus murinus
ENSMICG00000000542
N
0.849
ENSMLUG00000012056
Myotis lucifugus
ENSMLUG00000012056
N
0.848
ENSMLUG00000027396
Myotis lucifugus
ENSMLUG00000027396
N
0.727
GRHL3
Monodelphis domestica
ENSMODG00000013064
N
0.841
ENSMPUG00000015840
Mustela putorius furo
ENSMPUG00000015840
N
0.848
Grhl3
Mus musculus
ENSMUSG00000037188
N
0.786
GRHL3
Ornithorhynchus anatinus
ENSOANG00000002207
N
0.735
ENSOARG00000006636
Ovis aries
ENSOARG00000006636
N
0.817
GRHL3
Oryctolagus cuniculus
ENSOCUG00000013357
N
0.829
GRHL3
Otolemur garnettii
ENSOGAG00000011027
N
0.844
ENSONIG00000003513
Oreochromis niloticus
ENSONIG00000003513
N
0.748
GRHL3
Ochotona princeps
ENSOPRG00000003928
N
0.844
ENSP00000288955
Macaca fascicularis
ENSP00000288955
N
0.809
ENSPANG00000024748
Papio anubis
ENSPANG00000024748
N
0.809
GRHL3
Procavia capensis
ENSPCAG00000011355
N
0.857
ENSPMAG00000005876
Petromyzon marinus
ENSPMAG00000005876
I
0.703
ENSPPYG00000001721
Pongo abelii
ENSPPYG00000001721
N
0.839
ENSPSIG00000016215
Pelodiscus sinensis
ENSPSIG00000016215
N
0.806
GRHL3
Pan troglodytes
ENSPTRG00000000344
N
0.839
GRHL3
Pteropus vampyrus
ENSPVAG00000005827
N
0.844
Grhl3
Rattus norvegicus
ENSRNOG00000029427
N
0.777
ENSSHAG00000008311
Sarcophilus harrisii
ENSSHAG00000008311
N
0.833
GRHL3
Sus scrofa
ENSSSCG00000003539
N
0.883
ENSSTOG00000019842
Ictidomys tridecemlineatus
ENSSTOG00000019842
I
0.730
ENSSTOG00000023529
Ictidomys tridecemlineatus
ENSSTOG00000023529
N
0.899
GRHL3
Taeniopygia guttata
ENSTGUG00000001153
N
0.927
GRHL3
Tursiops truncatus
ENSTTRG00000016160
N
0.829
Gfo_R011603
Geospiza fortis
Gfo_R011603
N
0.927
Myotis_brandtii_Grhl3_10029711
Myotis brandtii
Myotis_brandtii_Grhl3_10029711
N
0.809
Pvit_10773
Pogona vitticeps
Pvit_10773
N
0.877
Tal_R005479
Tyto alba
Tal_R005479
N
0.923
grhl3.S
Xenopus laevis
XB-GENE-17342846
N
0.787
grhl3
Xenopus tropicalis
XB-GENE-919797
N
0.795
grhl3.L
Xenopus laevis
XB-GENE-919808
N
0.791