Cmyd_10003336 (Chelonia mydas)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04516 (CP2) IPR007604 Cmyd_10003336 T199513_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRHL2
M08129_2.00 		Homo sapiens
NNNAACTGGTTTNNN
NNNAAACCAGTTNNN		 ChIP-seq
Mathelier et al.(2014)
MA1105.1 		0.898 0.898
GRHL2
M09125_2.00 		Homo sapiens
AACYDGYYBDDC
GHHVRRCHRGTT		 Misc
Kulakovskiy et al.(2013)
GRHL2_HUMAN.H11MO.0.A 		0.898 0.898
Grhl2
M09126_2.00 		Mus musculus
RDCCDGTYYKDC
GHMRRACHGGHY		 Misc
Kulakovskiy et al.(2013)
GRHL2_MOUSE.H11MO.0.A 		0.898 0.898
GRHL2
M09558_2.00 		Homo sapiens
NRAACHDGHHDDDCHDGTTY
RAACHDGHHHDDCHDGTTYN		 Misc
Heinz et al.(2010)
HBE-GRHL2_GSE46194 		0.898 0.898
GRHL1
M03071_2.00 		Homo sapiens
RACYKGWHNDWCMGGTT
AACCKGWHNDWCMRGTY		 SELEX
Jolma et al.(2013)
GRHL1_1 		0.777 0.777
GRHL1
M03072_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Jolma et al.(2013)
GRHL1_2 		0.777 0.777
GRHL1
M03073_2.00 		Homo sapiens
HWAACCGGTTTD
HAAACCGGTTWD		 SELEX
Jolma et al.(2013)
GRHL1_3 		0.777 0.777
GRHL1
M04887_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_HT-SELEX 		0.777 0.777
GRHL1
M04888_2.00 		Homo sapiens
DAACMKGTTH
DAACMKGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_Methyl-HT-SELEX 		0.777 0.777
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10003336 Grainyhead 282 438

Links

Other Grainyhead family TFs
Other Chelonia mydas TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GABPA Anolis carolinensis ENSACAG00000014800 I
ENSAPLG00000009339 Anas platyrhynchos ENSAPLG00000009339 I
GABPA Bos taurus ENSBTAG00000019043 I
GABPA Canis familiaris ENSCAFG00000008512 I
GABPA Choloepus hoffmanni ENSCHOG00000010323 I
ENSCPOG00000004704 Cavia porcellus ENSCPOG00000004704 I
ENSCSAG00000009015 Chlorocebus sabaeus ENSCSAG00000009015 I
GABPA Dasypus novemcinctus ENSDNOG00000040145 I
Gabpa Dipodomys ordii ENSDORG00000014904 I
GABPA Equus caballus ENSECAG00000018900 I
GABPA Erinaceus europaeus ENSEEUG00000009111 I
ENSFALG00000011983 Ficedula albicollis ENSFALG00000011983 I
GABPA Felis catus ENSFCAG00000027000 I
GABPA Homo sapiens ENSG00000154727 D