CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
LDEC013994
(
Leptinotarsa decemlineata
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04516 (CP2)
IPR007604
LDEC013994
T199596_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
grh
M06209_2.00
Drosophila melanogaster
MTKGTTYHVY
RBHRAACMAK
B1H
Zhu et al.(2011)
grh_FlyReg_FBgn0259211
0.787
0.787
grh
M10616_2.00
Drosophila melanogaster
NNDDNBGGTDTHDHVN
NBDHDAHACCVNHHNN
Transfac
Matys et al.(2006)
I$ELF1_01
0.787
0.787
grh
M10617_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$GRH_01
0.787
0.787
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LDEC013994-PA
Grainyhead
357
431
SRPWHDFGRQNDADKIQIPKTFSPVGFKYHLETPISTSQRREDDRITYINKGQFYGITLEYIPDPEKQLKSQTVK
Links
Other
Grainyhead
family TFs
Other
Leptinotarsa decemlineata
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL000577
Aedes aegypti
AAEL000577
I
0.787
AATE012841
Anopheles atroparvus
AATE012841
I
0.733
ACOM038990
Anopheles coluzzii
ACOM038990
I
0.747
ACUA023017
Anopheles culicifacies
ACUA023017
N
0.733
AEPI006364
Anopheles epiroticus
AEPI006364
I
0.747
AGAP005564
Anopheles gambiae
AGAP005564
I
0.733
AMEM013718
Anopheles merus
AMEM013718
I
0.747
Cflo_10585--XP_394553.3_APIME
Camponotus floridanus
Cflo_10585--XP_394553.3_APIME
I
0.787
DAPPUDRAFT_64332
Daphnia pulex
DAPPUDRAFT_64332
I
0.707
grh
Drosophila yakuba
FBgn0067967
I
0.787
GG21828
Drosophila erecta
FBgn0114006
I
0.787
GH22029
Drosophila grimshawi
FBgn0129490
I
0.773
GL17227
Drosophila persimilis
FBgn0154830
I
0.787
GM21828
Drosophila sechellia
FBgn0176705
I
0.787
GD11322
Drosophila simulans
FBgn0183071
I
0.787
GK22232
Drosophila willistoni
FBgn0224217
I
0.787
grh
Drosophila melanogaster
FBgn0259211
D
0.787
GA30279
Drosophila pseudoobscura
FBgn0263821
I
0.787
GB46725
Apis mellifera
GB46725
I
0.773
Hsal_11404--XP_394553.3_APIME
Harpegnathos saltator
Hsal_11404--XP_394553.3_APIME
I
0.760
ISCW008081
Ixodes scapularis
ISCW008081
I
0.720
KGM_04625
Danaus plexippus
KGM_04625
I
0.787
L798_10784
Zootermopsis nevadensis
L798_10784
N
0.747
LCUP010301
Lucilia cuprina
LCUP010301
I
0.760
LLOJ002492
Lutzomyia longipalpis
LLOJ002492
I
0.803
MCINX002723
Melitaea cinxia
MCINX002723
I
0.760
MDOA000476
Musca domestica
MDOA000476
I
0.813
NV11321
Nasonia vitripennis
NV11321
I
0.760
RPRC012881
Rhodnius prolixus
RPRC012881
I
0.787
TC004589
Tribolium castaneum
TC004589
I
0.947
YQE_09165
Dendroctonus ponderosae
YQE_09165
I
0.920