CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo9g028850
(
Brassica oleracea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bo9g028850
T199960_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo9g028850.1
GRAS
255
630
LVNLLTGCLEAIRTRNIAAINHLIARTGELASPRGTTPMTRLISYYTEALALRVSRMWPHIFHIAPPREFERTLEDDDAWRFLNQATPIPKFIHYTANEMLLRAFEGRERVHIIDFDIKQGLQWPSFFQSLASRSNPPRHVRITGVGESKLELNETGDRLHGFAEAMNLPFEFHPVVDRLEDVRLWMLHVKEGEAVAVNCLMQMHKTLYDDGTGGAAFRNFVGLVRSTNPVAVVIAEQEAEHDSAQLETRVCNSLKYYSAVFDVMHTHLRADSLMRVKIEEVLFGREIRNIVACEGSHRQGRHVGFGQWRRMMEQLGFRSLGVSEREVLQSKMLLRMYGDGDEGFFNVERSAEDGDGGGVTLRWLEQPLYTISAWG
Links
Other
GRAS
family TFs
Other
Brassica oleracea
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30190.m011131
Ricinus communis
30190.m011131
N
0.700
SCL28
Arabidopsis thaliana
AT1G63100
N
0.858
Bo00795s120
Brassica oleracea
Bo00795s120
N
0.864
Bostr.22157s0011
Boechera stricta
Bostr.22157s0011
N
0.853
Bra026999
Brassica rapa
Bra026999
N
0.861
Bra027620
Brassica rapa
Bra027620
N
0.940
Cagra.9501s0015
Capsella grandiflora
Cagra.9501s0015
N
0.842
Carubv10019945m.g
Capsella rubella
Carubv10019945m.g
N
0.853
fgenesh1_pg.C_scaffold_2000170
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2000170
N
0.853
orange1.1g005954m.g
Citrus sinensis
orange1.1g005954m.g
N
0.701
Thhalv10023324m.g
Eutrema salsugineum
Thhalv10023324m.g
N
0.875