CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_5g058860
(
Medicago truncatula
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
MTR_5g058860
T200561_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES97716
GRAS
116
497
LVHLLMAAAEALTGTNKSHHLAQVILIRLKDLVSSTHGTNMERLAAYFTDALQTLLNGTDCGGHHKLCLLTGPHQTDILSAFQLLQDMSPYVKFAHFTANQAILEAVTHERRVHIVDFDIMEGAQWASLIQSLSSRKEGLPGPHLRITALSRNKERGNGRSRSSFATVQETGRRLTTFAASVGQPFTFHQCRLESDERFRTSSLKLVRGEALVFNCVMHLPHLSYRASDSIASFLNGAKELGTKLVTLVEEEVGPITDAGFVGLFMDSLHRYSAMYDSFEAGFPMNKWARSLVEQVFLGPRIMGSVAQLYMTGEEEEQERGSWGEWLGVEGFRGVNISYGNHCQAKLLLGLFNDGYRVEELGNNKLVLGWKSRRLLSASVWT
Links
Other
GRAS
family TFs
Other
Medicago truncatula
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29908.m006159
Ricinus communis
29908.m006159
N
0.712
cassava44367.m1
Manihot esculenta
cassava44367.m1
N
0.715
Ca_23494
Cicer arietinum
Ca_23494
N
0.823
Ca_26279
Cicer arietinum
Ca_26279
N
0.728
Ciclev10000940m.g
Citrus clementina
Ciclev10000940m.g
N
0.736
Eucgr.L03490
Eucalyptus grandis
Eucgr.L03490
N
0.712
evm.TU.supercontig_36.32
Carica papaya
evm.TU.supercontig_36.32
N
0.709
gene11137-v1.0-hybrid
Fragaria vesca
gene11137-v1.0-hybrid
N
0.700
GLYMA04G43090
Glycine max
GLYMA04G43090
N
0.717
GLYMA06G11610
Glycine max
GLYMA06G11610
N
0.715
Gorai.010G048800
Gossypium raimondii
Gorai.010G048800
N
0.707
LjT15C06.70.nc
Lotus japonicus
LjT15C06.70.nc
N
0.792
MTR_3g072710
Medicago truncatula
MTR_3g072710
N
0.717
orange1.1g011012m.g
Citrus sinensis
orange1.1g011012m.g
N
0.739
PGSC0003DMG400012071
Solanum tuberosum
PGSC0003DMG400012071
N
0.704
Pm004863
Prunus mume
Pm004863
N
0.706
POPTR_0005s15900
Populus trichocarpa
POPTR_0005s15900
N
0.700
TCM_035069
Theobroma cacao
TCM_035069
N
0.720
VIT_18s0001g03310
Vitis vinifera
VIT_18s0001g03310
N
0.731