CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB11G28110
(
Oryza brachyantha
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OB11G28110
T200625_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB11G28110.1
GRAS
169
541
LHTLLLHCAKAVVDERRSAAELLEQIRQHASPTGDAVQRLGHCFAKGLEARLSGTGIHAYRSLAATRTSTADFLKAYQLFMSTCCFRKVAFTFANKAIFNAAAGRSRLHIVDYGLHHGFQWPELLQWLGEREGGPPVVRITHIDLPQSGFRPAKHMEEMGTRLSRCAHQFGVPFEFRLIVAPQWQSVCVDDINMEPDEVLTVNDLFNFRTLMDESVVIDSKSPRDIVLSNIAKMRPDVFVHGTVNGSHGITFLSRFREALFYHSAMFDMLDATMPRESQLRLVLEQDILGWVALNAIACEGEDRVERGETYKQWQVRNQRAGLRQLPLNRETLVMVTNMVKKHYHKDFVIEEDQQWLLQGWKGRILFAHSTWV
Links
Other
GRAS
family TFs
Other
Oryza brachyantha
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_43730
Hordeum vulgare
MLOC_43730
N
0.736
Pavir.J13478
Panicum virgatum
Pavir.J13478
N
0.744
Pavir.J35282
Panicum virgatum
Pavir.J35282
N
0.774
Sb05g027788
Sorghum bicolor
Sb05g027788
N
0.880
Traes_4AL_F023A8691
Triticum aestivum
Traes_4AL_F023A8691
N
0.736
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.725
Traes_4DS_82065CB2C
Triticum aestivum
Traes_4DS_82065CB2C
N
0.742