CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OBART01G36810
(
Oryza barthii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OBART01G36810
T200631_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART01G36810.1
GRAS
405
775
LETLLIHCAQSVATDDRRSATELLKQIRQHAHANGDGDQRLAHCFANGLEARLAGTGSQIYKNYTITRLPCTDVLKAYQLYLAACPFKKISHYFANQTILNAVEKAKKVHIVDYGIYYGFQWPCLIQRLSNRPGGPPKLRITGIDTPQPGFRPAERTEETGRYLSDYAQTFNVPFEFQAIASRFEAVRMEDLHIEEDEVLIVNCMFKFKNLMDESVVAESPRNMALKTIRKMNPHVFIHGVVNGSYNAPFFVTRFREALFHYSAIFDMLETNIPKDNEQRLLIESALFSREAINVISCEGLERMERPETYKQWQVRNQRVGFKQLPLNQDMMKRAREKVRCYHKDFIIDEDNRWLLQGWKGRILFALSTWK
Links
Other
GRAS
family TFs
Other
Oryza barthii
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_029500
Albugo laibachii
ALNC14_029500
N
estExt_fgenesh1_kg.C_2070034
Phytophthora capsici
estExt_fgenesh1_kg.C_2070034
N
estExt_fgenesh1_pm.C_680840001
Phytophthora capsici
estExt_fgenesh1_pm.C_680840001
N
estExt_Genewise1Plus.C_2050016
Phytophthora capsici
estExt_Genewise1Plus.C_2050016
I
F443_00625
Phytophthora parasitica
F443_00625
N
F443_20671
Phytophthora parasitica
F443_20671
I
F443_20702
Phytophthora parasitica
F443_20702
I
fgenesh1_kg.C_scaffold_15000102
Phytophthora capsici
fgenesh1_kg.C_scaffold_15000102
I
fgenesh_scip_prom.46568.9768
Phytophthora kernoviae
fgenesh_scip_prom.46568.9768
N
HpaG809807
Hyaloperonospora arabidopsidis
HpaG809807
N
HpaG810857
Hyaloperonospora arabidopsidis
HpaG810857
I
maker-pag1_scaffold_154-snap-gene-0.25
Pythium aphanidermatum
maker-pag1_scaffold_154-snap-gene-0.25
N
maker-pag1_scaffold_266-snap-gene-0.11
Pythium aphanidermatum
maker-pag1_scaffold_266-snap-gene-0.11
I
maker-par_contig_3706-snap-gene-0.1
Pythium arrhenomanes
maker-par_contig_3706-snap-gene-0.1
N
maker-pir_contig_516-fgenesh-gene-0.3
Pythium irregulare
maker-pir_contig_516-fgenesh-gene-0.3
N
maker-pir_contig_516-fgenesh-gene-0.8
Pythium irregulare
maker-pir_contig_516-fgenesh-gene-0.8
N
maker-piw_contig_637-fgenesh-gene-0.5
Pythium iwayamai
maker-piw_contig_637-fgenesh-gene-0.5
I
maker-piw_contig_637-snap-gene-0.12
Pythium iwayamai
maker-piw_contig_637-snap-gene-0.12
N
maker-pve_contig_506-fgenesh-gene-0.3
Pythium vexans
maker-pve_contig_506-fgenesh-gene-0.3
N
Phyra80922
Phytophthora ramorum
Phyra80922
N
Phyra85497
Phytophthora ramorum
Phyra85497
N
Physo132945
Phytophthora sojae
Physo132945
I
Physo132965
Phytophthora sojae
Physo132965
N
Physo138282
Phytophthora sojae
Physo138282
N
PITG_14400
Phytophthora infestans
PITG_14400
I
PYU1_G002844
Pythium ultimum
PYU1_G002844
N
PYU1_G002847
Pythium ultimum
PYU1_G002847
N
PYU1_G002849
Pythium ultimum
PYU1_G002849
I
snap_masked-pve_contig_397-abinit-gene-0.26
Pythium vexans
snap_masked-pve_contig_397-abinit-gene-0.26
N