CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART12G16530
(
Oryza barthii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OBART12G16530
T200681_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART12G16530.1
GRAS
265
637
LRTLLIHCAQAVATDDRRSATELLKQIKQHAKPTGDATQRLAHCFAEGLQARIAGTGSLVHQSLVAKRTSAVDILQAYQLYMAAICFKKVSFIFSNQTIYNASLGKKKIHIVDYGIQYGFQWPCFLRRISQREGGPPEVRMTGIDLPQPGFRPTERIEETGHRLSKYAQEFGVPFKYNAIAAVKMESVRKEDLNIDPDEVLIVNCQYQFKNLMDESVVIDSPRDIVLSNIRKMQPHVFIHAIVNGSFSAPFFVTRFREALFFYSALFDVLDATTPRESEQRLLIEQNIFGRAALNVIACEGIDRVERPETYKQWQVRNQRAGFKQLPLNPEIVQVVRNKVKDCYHKDFVIDIDHQWLLQGWKGRILYAISTWT
Links
Other
GRAS
family TFs
Other
Oryza barthii
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CERSUDRAFT_114695
Ceriporiopsis subvermispora
CERSUDRAFT_114695
I
0.000
DACRYDRAFT_22521
Dacryopinax sp
DACRYDRAFT_22521
I
0.000
DICSQDRAFT_88737
Dichomitus squalens
DICSQDRAFT_88737
I
0.000
EDP45487.1
Malassezia globosa
EDP45487.1
N
0.000
M408DRAFT_332528
Serendipita vermifera
M408DRAFT_332528
I
0.000
MSY001_1466
Malassezia sympodialis
MSY001_1466
N
0.000
PAN0_103d6719
Pseudozyma antarctica
PAN0_103d6719
N
0.000
PHSY_000426
Pseudozyma hubeiensis
PHSY_000426
N
0.000
PSEUBRA_SCAF9g01287
Pseudozyma brasiliensis
PSEUBRA_SCAF9g01287
N
0.000
RO3G_02623
Rhizopus oryzae
RO3G_02623
N
0.000
UHOR_05949
Ustilago hordei
UHOR_05949
N
0.000
UM03925
Ustilago maydis
UM03925
N
0.000
V565_176590
Rhizoctonia solani
V565_176590
I
0.000