CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400003047
(
Solanum tuberosum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
PGSC0003DMG400003047
T201106_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400007878
GRAS
1
182
MLHVKEGESVAVNCVLQMHRLLYDSSGGILRDFLGLIRSTNPTIILMAEQEAEHNEPSLEARLVNSLRYYAAVFDSIGFSLPLDSPARIKIEELFARDIRNIIACEGRDRTERHECFGKWRKLMEQGGFRCTGITERELFQSQMLLKMYSCEDYRVTKQGNDDAALTLSWLDQPLCTVSAWT
PGSC0003DMT400007879
GRAS
297
664
LISLLVSCVEAIGSRNVTGVNQLIARLGQLASPRGSPVSRLTAYFTEALALRVARIWPHIFHIIPPRDLDRLDDDSSTALRLLNQVSPIPKFIHFTSNEILLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRPNPPTHVRITGIGESKQDLVETGDRLAEFAEALNLAFEFHPVVDRLEDVRLWMLHVKEGESVAVNCVLQMHRLLYDSSGGILRDFLGLIRSTNPTIILMAEQEAEHNEPSLEARLVNSLRYYAAVFDSIGFSLPLDSPARIKIEELFARDIRNIIACEGRDRTERHECFGKWRKLMEQGGFRCTGITERELFQSQMLLKMYSCEDYRVTKQGNDDAALTLSWLDQPLCTVSAWT
Links
Other
GRAS
family TFs
Other
Solanum tuberosum
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_05262
Capronia coronata
A1O1_05262
I
A1O3_09505
Capronia epimyces
A1O3_09505
I
A1O5_02490
Cladophialophora psammophila
A1O5_02490
N
A1O7_07473
Cladophialophora yegresii
A1O7_07473
N
A1O9_04870
Exophiala aquamarina
A1O9_04870
N
HMPREF1120_02110
Exophiala dermatitidis
HMPREF1120_02110
N
HMPREF1541_08216
Cyphellophora europaea
HMPREF1541_08216
N
PV05_05964
Exophiala xenobiotica
PV05_05964
I
PV07_11450
Cladophialophora immunda
PV07_11450
N
PV10_07582
Exophiala mesophila
PV10_07582
N
PV11_01466
Exophiala sideris
PV11_01466
N
Z517_02809
Fonsecaea pedrosoi
Z517_02809
N
Z518_09480
Rhinocladiella mackenziei
Z518_09480
I
Z519_07023
Cladophialophora bantiana
Z519_07023
N