CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si026111m.g
(
Setaria italica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Si026111m.g
T201517_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si026111m
GRAS
242
616
LHTLLIRCAEAVASNDYRGAADLLERIKHHSSPTGDGTHRLAHCFAMGLEARLAGTGSQIYRLFMDKLTSSTVGVLKAYQFHMTSCCFLLVQHLFSNKTIYNAVTGRKKLHIVHYGLGRGLQWPDLLRWLARRDGGPPEVRLTGIDNPQPRFRPAQHIEETGHRLSECARRIGVPFRFRGIAKKLEAVQVEDLDIDPDEVLVINSILHLQSLMDESVFVERSNPRDMVLSTIRKMRPSVFIHAVNNGSHSSAFFMTRFREVLHSYTALFDMMDAIAPRDDDKRLLVERDMFAACITNIIACEGMDRVQRPQSYKQWQIRSQRAGLRQLPLDPEIVQMLKDKVKKEYHKSFVINEDQHWLLQGWKGRVLYALSMWT
Links
Other
GRAS
family TFs
Other
Setaria italica
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29814.m000739
Ricinus communis
29814.m000739
I
0.000
ABI4
Arabidopsis lyrata
Al_scaffold_0004_2621
I
0.000
ABI4
Arabidopsis thaliana
AT2G40220
I
0.000
BGIOSGA018232
Oryza indica
BGIOSGA018232
I
0.000
Bo3g034810
Brassica oleracea
Bo3g034810
I
0.000
Bo4g025410
Brassica oleracea
Bo4g025410
I
0.000
Bostr.23794s0036
Boechera stricta
Bostr.23794s0036
I
0.000
Bra000178
Brassica rapa
Bra000178
I
0.000
Bra004978
Brassica rapa
Bra004978
I
0.000
Cagra.7053s0005
Capsella grandiflora
Cagra.7053s0005
I
0.000
Carubv10025253m.g
Capsella rubella
Carubv10025253m.g
I
0.000
cassava20838.m1
Manihot esculenta
cassava20838.m1
I
0.000
cassava41265.m1
Manihot esculenta
cassava41265.m1
I
0.000
Ca_12465
Cicer arietinum
Ca_12465
I
0.000
chr2.CM0002.60.nc
Lotus japonicus
chr2.CM0002.60.nc
I
0.000
Ciclev10033578m.g
Citrus clementina
Ciclev10033578m.g
I
0.000
Cla006708
Citrullus lanatus
Cla006708
I
0.000
gene21003-v1.0-hybrid
Fragaria vesca
gene21003-v1.0-hybrid
I
0.000
GLYMA02G43240
Glycine max
GLYMA02G43240
I
0.000
GLYMA14G06290
Glycine max
GLYMA14G06290
I
0.000
abi4
Zea mays
GRMZM2G093595
D
0.000
GSMUA_Achr3G10100_001
Musa acuminata
GSMUA_Achr3G10100_001
I
0.000
GSMUA_Achr5G07400_001
Musa acuminata
GSMUA_Achr5G07400_001
I
0.000
GSMUA_Achr9G18060_001
Musa acuminata
GSMUA_Achr9G18060_001
I
0.000
LPERR05G10140
Leersia perrieri
LPERR05G10140
I
0.000
Lus10009834.g
Linum usitatissimum
Lus10009834.g
I
0.000
Lus10040944.g
Linum usitatissimum
Lus10040944.g
I
0.000
MDP0000225376
Malus domestica
MDP0000225376
I
0.000
MDP0000628484
Malus domestica
MDP0000628484
I
0.000
mgf024416m
Mimulus guttatus
mgf024416m
I
0.000
MTR_5g082950
Medicago truncatula
MTR_5g082950
I
0.000
OGLUM05G13600
Oryza glumaepatula
OGLUM05G13600
I
0.000
OMERI05G11540
Oryza meridionalis
OMERI05G11540
I
0.000
ONIVA05G13490
Oryza nivara
ONIVA05G13490
I
0.000
OPUNC05G11000
Oryza punctata
OPUNC05G11000
I
0.000
orange1.1g038194m.g
Citrus sinensis
orange1.1g038194m.g
I
0.000
ORGLA05G0109500
Oryza glaberrima
ORGLA05G0109500
I
0.000
ABI4
Oryza sativa
OS05G0351200
I
0.000
Pavir.J29572
Panicum virgatum
Pavir.J29572
I
0.000
Pavir.J33237
Panicum virgatum
Pavir.J33237
I
0.000
Pavir.J38620
Panicum virgatum
Pavir.J38620
I
0.000
PGSC0003DMG400034739
Solanum tuberosum
PGSC0003DMG400034739
I
0.000
PGSC0003DMG400041883
Solanum tuberosum
PGSC0003DMG400041883
I
0.000
Pm018953
Prunus mume
Pm018953
I
0.000
POPTR_0008s07120
Populus trichocarpa
POPTR_0008s07120
I
0.000
POPTR_0010s19370
Populus trichocarpa
POPTR_0010s19370
I
0.000
PRUPE_ppa015230mg
Prunus persica
PRUPE_ppa015230mg
I
0.000
SapurV1A.0061s0480
Salix purpurea
SapurV1A.0061s0480
I
0.000
SapurV1A.0650s0090
Salix purpurea
SapurV1A.0650s0090
I
0.000
Sb09g016550
Sorghum bicolor
Sb09g016550
I
0.000
SELMODRAFT_427925
Selaginella moellendorffii
SELMODRAFT_427925
I
0.000
TCM_042471
Theobroma cacao
TCM_042471
I
0.000
Thhalv10017614m.g
Eutrema salsugineum
Thhalv10017614m.g
I
0.000
ABI4
Vitis vinifera
VIT_13s0067g01400
I
0.000