Solyc12g005340.1 (Solanum lycopersicum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 Solyc12g005340.1 T201592_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc12g005340.1.1 GRAS 188 558

Links

Other GRAS family TFs
Other Solanum lycopersicum TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00043p00136400 Amborella trichopoda AMTR_s00043p00136400 N 0.734
Aquca_005_00404 Aquilegia coerulea Aquca_005_00404 N 0.748
BGIOSGA025902 Oryza indica BGIOSGA025902 N 0.713
BRADI1G25370 Brachypodium distachyon BRADI1G25370 N 0.713
cassava24578.valid.m1 Manihot esculenta cassava24578.valid.m1 N 0.794
Ca_06943 Cicer arietinum Ca_06943 N 0.791
Ciclev10007843m.g Citrus clementina Ciclev10007843m.g N 0.805
Cucsa.053270 Cucumis sativus Cucsa.053270 N 0.783
Eucgr.F03414 Eucalyptus grandis Eucgr.F03414 N 0.786
F775_07373 Aegilops tauschii F775_07373 N 0.713
gene03285-v1.0-hybrid Fragaria vesca gene03285-v1.0-hybrid N 0.808
GLYMA06G41500 Glycine max GLYMA06G41500 N 0.789
GLYMA12G16750 Glycine max GLYMA12G16750 N 0.772
GLYMA12G34420 Glycine max GLYMA12G34420 N 0.775
GLYMA13G36120 Glycine max GLYMA13G36120 N 0.770
Gorai.002G080600 Gossypium raimondii Gorai.002G080600 N 0.802
Gorai.009G427800 Gossypium raimondii Gorai.009G427800 N 0.794
Gorai.013G164700 Gossypium raimondii Gorai.013G164700 N 0.802
GRMZM5G821439 Zea mays GRMZM5G821439 N 0.729
GSMUA_Achr6G24310_001 Musa acuminata GSMUA_Achr6G24310_001 N 0.718
Lus10035840.g Linum usitatissimum Lus10035840.g N 0.789
Lus10036623.g Linum usitatissimum Lus10036623.g N 0.778
MDP0000205622 Malus domestica MDP0000205622 N 0.802
mgf007614m Mimulus guttatus mgf007614m N 0.802
MLOC_37712 Hordeum vulgare MLOC_37712 N 0.724
MTR_2g082090 Medicago truncatula MTR_2g082090 N 0.775
OB07G23640 Oryza brachyantha OB07G23640 N 0.729
OBART07G17780 Oryza barthii OBART07G17780 N 0.710
OGLUM07G17420 Oryza glumaepatula OGLUM07G17420 N 0.713
OLONG_024541 Oryza longistaminata OLONG_024541 N 0.713
OMERI07G14660 Oryza meridionalis OMERI07G14660 N 0.710
ONIVA07G16090 Oryza nivara ONIVA07G16090 N 0.713
OPUNC07G16570 Oryza punctata OPUNC07G16570 N 0.724
orange1.1g040563m.g Citrus sinensis orange1.1g040563m.g N 0.740
ORGLA07G0142600 Oryza glaberrima ORGLA07G0142600 N 0.710
ORUFI07G18480 Oryza rufipogon ORUFI07G18480 N 0.713
CIGR1 Oryza sativa OS07G0545800 N 0.710
Pavir.Bb02923 Panicum virgatum Pavir.Bb02923 N 0.729
Pavir.J35699 Panicum virgatum Pavir.J35699 N 0.729
PGSC0003DMG400019232 Solanum tuberosum PGSC0003DMG400019232 N 0.854
PGSC0003DMG400021802 Solanum tuberosum PGSC0003DMG400021802 N 0.984
PK07026.1 Cannabis sativa PK07026.1 N 0.783
Pm029452 Prunus mume Pm029452 N 0.816
POPTR_0001s44090 Populus trichocarpa POPTR_0001s44090 N 0.840
POPTR_0011s13460 Populus trichocarpa POPTR_0011s13460 N 0.827
PRUPE_ppa003323mg Prunus persica PRUPE_ppa003323mg N 0.816
SapurV1A.0327s0070 Salix purpurea SapurV1A.0327s0070 N 0.797
SapurV1A.0664s0120 Salix purpurea SapurV1A.0664s0120 N 0.762
SapurV1A.3085s0020 Salix purpurea SapurV1A.3085s0020 N 0.833
Sb02g035680 Sorghum bicolor Sb02g035680 N 0.718
Si029156m.g Setaria italica Si029156m.g N 0.726
Solyc06g035620.2 Solanum lycopersicum Solyc06g035620.2 N 0.766
Solyc07g063940.1 Solanum lycopersicum Solyc07g063940.1 N 0.865
TCM_031132 Theobroma cacao TCM_031132 N 0.813
Traes_2AS_620B821281 Triticum aestivum Traes_2AS_620B821281 N 0.710
Traes_2BS_4600D4B54 Triticum aestivum Traes_2BS_4600D4B54 N 0.718
Traes_2DS_2D035BAFD Triticum aestivum Traes_2DS_2D035BAFD N 0.713
TRIUR3_35245 Triticum urartu TRIUR3_35245 N 0.713
VIT_19s0014g04940 Vitis vinifera VIT_19s0014g04940 N 0.805