CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
29916.m000544
(
Ricinus communis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
29916.m000544
T202023_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29916.m000544
GRAS
425
786
LLDQLYKAAELVGTGNFSHAQGILARLNQQLSPIGKPLHRAAFYFKEALQLLLLMNNNPVTSLPPRSPTPFDVIFKLGAYKVFSEVSPLIQFVNFTCNQALLEALSEADRIHIIDFDIGFGAQWASFMQELPRNRGAPSLKITAFASPSTHHPVEVLLMRENLTQFANEIGISFELDVINFDSLEQSCYSLPIFRSKENEAIAVHFPVWSASNQPAALPSLLRFVKQLSPKIVVSLDRGDRTDLPFPQHILHALQSHILLLESLDAVNVASDAVNKIEKFLLQPRIESTVLGRLRAPDKMPTWKTIFASAGFSPVTFSNFTETQAECVVKRTPVRGFHVEKRQASLVLCWQRRDLISASAWR
Links
Other
GRAS
family TFs
Other
Ricinus communis
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O3_09996
Capronia epimyces
A1O3_09996
I
A1O5_08901
Cladophialophora psammophila
A1O5_08901
I
A1O7_06013
Cladophialophora yegresii
A1O7_06013
I
A1O9_07978
Exophiala aquamarina
A1O9_07978
I
AB07784.1
Alternaria brassicicola
AB07784.1
I
ACRE_056110
Acremonium chrysogenum
ACRE_056110
I
AOL_s00173g128
Arthrobotrys oligospora
AOL_s00173g128
N
ARB_03655
Arthroderma benhamiae
ARB_03655
I
AUEXF2481DRAFT_33171
Aureobasidium subglaciale
AUEXF2481DRAFT_33171
I
BAUCODRAFT_190174
Baudoinia compniacensis
BAUCODRAFT_190174
I
Bcin11g02290
Botrytis cinerea
Bcin11g02290
I
BDDG_01232
Blastomyces dermatitidis
BDDG_01232
I
CADANGAG00006720
Aspergillus niger
CADANGAG00006720
I
ANIA_01114
Aspergillus nidulans
CADANIAG00001514
I
CFIO01_08807
Colletotrichum fioriniae
CFIO01_08807
I
CH063_12530
Colletotrichum higginsianum
CH063_12530
I
CHGG_00821
Chaetomium globosum
CHGG_00821
I
CIMG_07010
Coccidioides immitis
CIMG_07010
I
CMQ_8079
Grosmannia clavigera
CMQ_8079
I
Cob_01636
Colletotrichum orbiculare
Cob_01636
I
COCC4DRAFT_128615
Bipolaris maydis
COCC4DRAFT_128615
I
COCCADRAFT_8201
Bipolaris zeicola
COCCADRAFT_8201
I
COCMIDRAFT_34913
Bipolaris oryzae
COCMIDRAFT_34913
I
COCSADRAFT_163131
Bipolaris sorokiniana
COCSADRAFT_163131
I
COCVIDRAFT_25662
Bipolaris victoriae
COCVIDRAFT_25662
I
CPC735_033720
Coccidioides posadasii
CPC735_033720
I
CSUB01_01372
Colletotrichum sublineola
CSUB01_01372
I
DOTSEDRAFT_68329
Dothistroma septosporum
DOTSEDRAFT_68329
I
estExt_fgenesh1_pg.C_60292
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_60292
I
estExt_fgenesh1_pg.C_chr_11274
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_11274
I
estExt_Genewise1Plus.C_12488
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_12488
I
EURHEDRAFT_515289
Aspergillus ruber
EURHEDRAFT_515289
I
F503_02328
Ophiostoma piceae uamh
F503_02328
I
fgenesh1_pm.00083_#_572
Aspergillus carbonarius
fgenesh1_pm.00083_#_572
I
G647_06523
Cladophialophora carrionii
G647_06523
I
GGTG_10163
Gaeumannomyces graminis
GGTG_10163
I
GLRG_03970
Colletotrichum graminicola
GLRG_03970
I
GMDG_03925
Pseudogymnoascus destructans
GMDG_03925
I
H072_10339
Dactylellina haptotyla
H072_10339
N
H101_05541
Trichophyton interdigitale
H101_05541
I
H102_00883
Trichophyton rubrum
H102_00883
I
H105_00889
Trichophyton soudanense
H105_00889
I
HMPREF1120_03828
Exophiala dermatitidis
HMPREF1120_03828
I
HMPREF1541_01524
Cyphellophora europaea
HMPREF1541_01524
I
HMPREF1624_05225
Sporothrix schenckii
HMPREF1624_05225
I
LEMA_P051770.1
Leptosphaeria maculans
LEMA_P051770.1
I
M437DRAFT_59197
Aureobasidium melanogenum
M437DRAFT_59197
I
M438DRAFT_398194
Aureobasidium pullulans
M438DRAFT_398194
I
MAC_05305
Metarhizium acridum
MAC_05305
I
MAJ_02265
Metarhizium majus
MAJ_02265
I
MAM_06778
Metarhizium album
MAM_06778
I
MBM_05753
Marssonina brunnea
MBM_05753
I
MCYG_01486
Microsporum canis
MCYG_01486
I
MCYG_01486
Arthroderma otae
MCYG_01486
I
MGG_00190
Magnaporthe oryzae
MGG_00190
I
MGYG_04584
Microsporum gypseum
MGYG_04584
I
MPH_03506
Macrophomina phaseolina
MPH_03506
I
MYCFIDRAFT_209944
Pseudocercospora fijiensis
MYCFIDRAFT_209944
I
Mycgr3G107535
Zymoseptoria tritici
Mycgr3G107535
I
MYCTH_2136960
Myceliophthora thermophila
MYCTH_2136960
I
NCU03077
Neurospora crassa
NCU03077
D
NEUTE1DRAFT_91395
Neurospora tetrasperma
NEUTE1DRAFT_91395
I
OIDMADRAFT_120781
Oidiodendron maius
OIDMADRAFT_120781
I
PAAG_07715
Paracoccidioides sp lutzii
PAAG_07715
I
PABG_00408
Paracoccidioides brasiliensis
PABG_00408
I
Pc13g11100
Penicillium chrysogenum
Pc13g11100
I
PCH_Pc13g11100
Penicillium rubens
PCH_Pc13g11100
I
PDE_00349
Penicillium oxalicum
PDE_00349
I
PDIP_28360
Penicillium digitatum
PDIP_28360
I
PEX1_036250
Penicillium expansum
PEX1_036250
I
PFICI_01479
Pestalotiopsis fici
PFICI_01479
I
PITC_060100
Penicillium italicum
PITC_060100
I
PMAA_043170
Talaromyces marneffei
PMAA_043170
I
PMAA_043170
Penicillium marneffei
PMAA_043170
I
PODANS_1_11860
Podospora anserina
PODANS_1_11860
I
PTT_17167
Pyrenophora teres
PTT_17167
I
PV04_06397
Capronia semiimmersa
PV04_06397
I
PV05_08455
Exophiala xenobiotica
PV05_08455
I
PV06_02480
Exophiala oligosperma
PV06_02480
I
PV07_03516
Cladophialophora immunda
PV07_03516
I
PV08_02622
Exophiala spinifera
PV08_02622
I
PV09_02511
Verruconis gallopava
PV09_02511
I
PV10_08190
Exophiala mesophila
PV10_08190
I
PV11_07448
Exophiala sideris
PV11_07448
I
PVAR5_3751
Byssochlamys spectabilis
PVAR5_3751
I
S40285_00857
Stachybotrys chlorohalonata
S40285_00857
I
S40288_03500
Stachybotrys chartarum
S40288_03500
I
SAPIO_CDS3083
Scedosporium apiospermum
SAPIO_CDS3083
I
SBOR_4877
Sclerotinia borealis
SBOR_4877
I
SEPMUDRAFT_129980
Sphaerulina musiva
SEPMUDRAFT_129980
I
SETTUDRAFT_156846
Setosphaeria turcica
SETTUDRAFT_156846
I
SMAC_02806
Sordaria macrospora
SMAC_02806
I
SNOG_06810
Stagonospora nodorum
SNOG_06810
I
SNOG_06810
Phaeosphaeria nodorum
SNOG_06810
I
SPBR_04826
Sporothrix brasiliensis
SPBR_04826
I
SS1G_01557
Sclerotinia sclerotiorum
SS1G_01557
I
TEQG_07596
Trichophyton equinum
TEQG_07596
I
THITE_2143564
Thielavia terrestris
THITE_2143564
I
TRIATDRAFT_198898
Trichoderma atroviride
TRIATDRAFT_198898
I
TRIREDRAFT_112532
Trichoderma reesei
TRIREDRAFT_112532
I
TRIVIDRAFT_142610
Trichoderma virens
TRIVIDRAFT_142610
I
TRV_02590
Trichophyton verrucosum
TRV_02590
I
TSTA_076950
Talaromyces stipitatus
TSTA_076950
I
U727_00434280111
Penicillium solitum
U727_00434280111
I
UCREL1_11189
Eutypa lata
UCREL1_11189
I
UREG_05851
Uncinocarpus reesii
UREG_05851
I
UV8b_5026
Ustilaginoidea virens
UV8b_5026
I
V499_06127
Pseudogymnoascus pannorum
V499_06127
I
VDAG_03217
Verticillium dahliae
VDAG_03217
I
VHEMI06472
Torrubiella hemipterigena
VHEMI06472
I
X797_003719
Metarhizium robertsii
X797_003719
I
Z517_01173
Fonsecaea pedrosoi
Z517_01173
I
Z518_05389
Rhinocladiella mackenziei
Z518_05389
I
Z519_03752
Cladophialophora bantiana
Z519_03752
I