CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.055340
(
Cucumis sativus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cucsa.055340
T202121_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.055340.1
GRAS
46
468
LIHLLLTCANHVAVGSLDSANLALDQISHLASPDGDTMQRIAAYFAEALADRILKTWPGLYKAFNSTKIPMVSEEILVKKLFFDMFPFLKVAFVLTNQAIVEAMEGEKMIHIIDLNANETAQWLALLQILSVRPEGPPHLRITGVHPRQEILDQMARRLTNEAEKLDIPFQFNSVVSRLEDLDMEKLRVKTGEALAINSVLQLHNFLGYDNEALQKPSPSAAKNVNGVQYSRYPHLNQTTLRELLDKDMVNGCSPSPDSVSSSALSQANATKIDSFLNGLWSLTPKVMVVTEQDSNHNGTTVMERLLEALHTYAAIFDCLESNMSRTSLERLKLEKMLFGEEIKNIIACEGAERKERHEKHETWNQRFDVAGFRQVSLSYYGMLQARSLLQGYGCGGYRMKEENGCVMICWQDRPLFSVSAWR
Links
Other
GRAS
family TFs
Other
Cucumis sativus
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AUEXF2481DRAFT_44841
Aureobasidium subglaciale
AUEXF2481DRAFT_44841
N
0.000
M437DRAFT_54765
Aureobasidium melanogenum
M437DRAFT_54765
N
0.000
M438DRAFT_281100
Aureobasidium pullulans
M438DRAFT_281100
N
0.000
Pc20g03760
Penicillium chrysogenum
Pc20g03760
N
0.000
Pc20g05900
Penicillium chrysogenum
Pc20g05900
N
0.000
PCH_Pc20g03760
Penicillium rubens
PCH_Pc20g03760
N
0.000
PVAR5_9032
Byssochlamys spectabilis
PVAR5_9032
N
0.000