CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pm.C_840044
(
Physcomitrella patens
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
estExt_fgenesh1_pm.C_840044
T202162_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pm.C_840044
GRAS
1
298
MLKAQMLFCEHCPFIQVPHIYANHAIMVAFKGAPRVHIIDYGILYGIQWPCLIHQLSQRPEGPPHLRITGIDRPQPGFRPSARIQDTGRRLAKLAKQMGVPFEFHAIAEKWEAITPAHLLLRDDEVLAVNSMFRFRHLLDESVTAASPRNLVLSRIRSLNPKIFVQGVLNAGYNAPFFMSRFREALAYFSTIFDSMECSFPAEHPDRQIIDHEIVGREILNVVACEGPERVERSETYRQWQARTMRAGFQQKPNSPDVMAKIRMAMRSYHRDYGIGEDGAWFLLGWKERITHAMTVWE
Links
Other
GRAS
family TFs
Other
Physcomitrella patens
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_05290
Beauveria bassiana
BBA_05290
N
CCM_03567
Cordyceps militaris
CCM_03567
N
CFIO01_04640
Colletotrichum fioriniae
CFIO01_04640
N
CGGC5_12360
Colletotrichum gloeosporioides
CGGC5_12360
N
Cob_06772
Colletotrichum orbiculare
Cob_06772
N
CSUB01_08287
Colletotrichum sublineola
CSUB01_08287
N
e_gw1.1.1456.1
Nectria haematococca
e_gw1.1.1456.1
N
e_gw1.3.1319.1
Nectria haematococca
e_gw1.3.1319.1
N
FFUJ_00526
Fusarium fujikuroi
FFUJ_00526
N
FGRRES_00713
Fusarium graminearum
FGRRES_00713
N
FPSE_00326
Fusarium pseudograminearum
FPSE_00326
N
GLRG_10465
Colletotrichum graminicola
GLRG_10465
N
NechaG30904
Fusarium solani
NechaG30904
N
TRIVIDRAFT_114321
Trichoderma virens
TRIVIDRAFT_114321
N