CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_005_00234
(
Aquilegia coerulea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Aquca_005_00234
T202237_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_005_00234.1
GRAS
171
541
LKQVIIACGKAVSDGDMMAAGWLMGELRKMVSVSGEPIQRLGAYMLEGLVAKLALTGSSIYKALRCKEPTGSELLSYMHILYEVCPYFKFGYLSANGAIAEALKGETRVHIIDFQIAQGSQWISLIQALAARPGGPPHIRITGIDDYTSAYARDGGLHIVGQRLSKLAESFKVPFEFHAGAMSGCEVELETLGVRPGEALAVNFALMLHHMPDESVSTANHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYSAVFESIDVRLPREHKERINVEQHCLAREVVNIIACEGAERVERHEVLGKWKARFRMAGFTPYPLSPVVNATIRNLLENYSEKYRLEEKDGALYLGWMNRALVTSCAWR
Aquca_005_00234.2
GRAS
171
541
LKQVIIACGKAVSDGDMMAAGWLMGELRKMVSVSGEPIQRLGAYMLEGLVAKLALTGSSIYKALRCKEPTGSELLSYMHILYEVCPYFKFGYLSANGAIAEALKGETRVHIIDFQIAQGSQWISLIQALAARPGGPPHIRITGIDDYTSAYARDGGLHIVGQRLSKLAESFKVPFEFHAGAMSGCEVELETLGVRPGEALAVNFALMLHHMPDESVSTANHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYSAVFESIDVRLPREHKERINVEQHCLAREVVNIIACEGAERVERHEVLGKWKARFRMAGFTPYPLSPVVNATIRNLLENYSEKYRLEEKDGALYLGWMNRALVTSCAWR
Aquca_005_00234.3
GRAS
171
541
LKQVIIACGKAVSDGDMMAAGWLMGELRKMVSVSGEPIQRLGAYMLEGLVAKLALTGSSIYKALRCKEPTGSELLSYMHILYEVCPYFKFGYLSANGAIAEALKGETRVHIIDFQIAQGSQWISLIQALAARPGGPPHIRITGIDDYTSAYARDGGLHIVGQRLSKLAESFKVPFEFHAGAMSGCEVELETLGVRPGEALAVNFALMLHHMPDESVSTANHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYSAVFESIDVRLPREHKERINVEQHCLAREVVNIIACEGAERVERHEVLGKWKARFRMAGFTPYPLSPVVNATIRNLLENYSEKYRLEEKDGALYLGWMNRALVTSCAWR
Aquca_005_00234.4
GRAS
171
541
LKQVIIACGKAVSDGDMMAAGWLMGELRKMVSVSGEPIQRLGAYMLEGLVAKLALTGSSIYKALRCKEPTGSELLSYMHILYEVCPYFKFGYLSANGAIAEALKGETRVHIIDFQIAQGSQWISLIQALAARPGGPPHIRITGIDDYTSAYARDGGLHIVGQRLSKLAESFKVPFEFHAGAMSGCEVELETLGVRPGEALAVNFALMLHHMPDESVSTANHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYSAVFESIDVRLPREHKERINVEQHCLAREVVNIIACEGAERVERHEVLGKWKARFRMAGFTPYPLSPVVNATIRNLLENYSEKYRLEEKDGALYLGWMNRALVTSCAWR
Aquca_005_00234.5
GRAS
171
541
LKQVIIACGKAVSDGDMMAAGWLMGELRKMVSVSGEPIQRLGAYMLEGLVAKLALTGSSIYKALRCKEPTGSELLSYMHILYEVCPYFKFGYLSANGAIAEALKGETRVHIIDFQIAQGSQWISLIQALAARPGGPPHIRITGIDDYTSAYARDGGLHIVGQRLSKLAESFKVPFEFHAGAMSGCEVELETLGVRPGEALAVNFALMLHHMPDESVSTANHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYSAVFESIDVRLPREHKERINVEQHCLAREVVNIIACEGAERVERHEVLGKWKARFRMAGFTPYPLSPVVNATIRNLLENYSEKYRLEEKDGALYLGWMNRALVTSCAWR
Aquca_005_00234.6
GRAS
171
541
LKQVIIACGKAVSDGDMMAAGWLMGELRKMVSVSGEPIQRLGAYMLEGLVAKLALTGSSIYKALRCKEPTGSELLSYMHILYEVCPYFKFGYLSANGAIAEALKGETRVHIIDFQIAQGSQWISLIQALAARPGGPPHIRITGIDDYTSAYARDGGLHIVGQRLSKLAESFKVPFEFHAGAMSGCEVELETLGVRPGEALAVNFALMLHHMPDESVSTANHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYSAVFESIDVRLPREHKERINVEQHCLAREVVNIIACEGAERVERHEVLGKWKARFRMAGFTPYPLSPVVNATIRNLLENYSEKYRLEEKDGALYLGWMNRALVTSCAWR
Links
Other
GRAS
family TFs
Other
Aquilegia coerulea
TFs
130 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CaO19.12230
Candida albicans
CaO19.12230
N
0.000
CaO19.4766
Candida albicans
CaO19.4766
N
0.000
CD36_08580
Candida dubliniensis
CD36_08580
N
0.000
CLUG_05051
Candida lusitaniae
CLUG_05051
N
0.000
CLUG_05051
Clavispora lusitaniae
CLUG_05051
N
0.000
CPAG_04295
Candida parapsilosis
CPAG_04295
N
0.000
CTRG_03264
Candida tropicalis
CTRG_03264
N
0.000
DEHA2A03520g
Debaryomyces hansenii
DEHA2A03520g
N
0.000
fgenesh1_pg.C_chr_3.1000414
Pichia stipitis
fgenesh1_pg.C_chr_3.1000414
N
0.000
G210_5450
Candida maltosa
G210_5450
N
0.000
GNLVRS01_PISO0I05530g
Millerozyma farinosa
GNLVRS01_PISO0I05530g
N
0.000
GNLVRS01_PISO0J07335g
Millerozyma farinosa
GNLVRS01_PISO0J07335g
N
0.000
HPODL_00099
Ogataea parapolymorpha
HPODL_00099
N
0.000
LELG_03589
Lodderomyces elongisporus
LELG_03589
N
0.000
PICST_30827
Scheffersomyces stipitis
PICST_30827
N
0.000
SPAPADRAFT_55840
Spathaspora passalidarum
SPAPADRAFT_55840
N
0.000