CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.26527s0463
(
Boechera stricta
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Bostr.26527s0463
T202285_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RGL2
M02031_2.00
Arabidopsis thaliana
NGTACGGHN
NDCCGTACN
PBM
Weirauch et al.(2014)
pTH8681
0.771
0.771
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.26527s0463.1.p
GRAS
164
523
LVQALVACAEAVQQGNLSLADALVKRVGSLAASQAGAMGKVATYFAEALARRIYRIHPSSASIDPFFEEILQMNFYDSSPYLKFAHFTANQAILEAVTMARGVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGVGAPSNREGIQELGSKLTQLAQAIGVEFEFSGVTTEKLSDLEPDMFETRPESETLVVNSVFELHPVLCRPGSIEKLLATVKAVKPSIVTVVEQEANHNGVVFLERFNEALHYYSSLFDSLEDRVVIPSQDRVMSEVYLGRQILNVVAAEGIDRIERHETLAQWRKRMGSAGFDPVNLGSHAFKQASLLLALFGSGDGYRVEESDGSLMLAWQMKPLIAASAWK
Links
Other
GRAS
family TFs
Other
Boechera stricta
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASU_06916
Ascaris suum
ASU_06916
N
0.000
Hba_20260
Heterorhabditis bacteriophora
Hba_20260
N
0.000
HCOI00551800
Haemonchus contortus
HCOI00551800
N
0.000
NBR_0001461501
Nippostrongylus brasiliensis
NBR_0001461501
N
0.000
TELCIR_16915
Teladorsagia circumcincta
TELCIR_16915
N
0.000
TELCIR_22583
Teladorsagia circumcincta
TELCIR_22583
N
0.000