CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.3264s0006
(
Capsella grandiflora
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cagra.3264s0006
T202328_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.3264s0006.1.p
GRAS
339
713
LRTMLVSCAQAVSINDRRTADDLLSRIRQHSSSYGDGTERLAHYFANSLEARLAGIGTQVYTALSSKKTSASDMLKAYQTYISVCPFKKIAIIFANHSIMQLASIANTKTIHIIDFGISYGFQWPSLIHRLAWRRGSSCKLRITGIELPQRGFRPAEGVIETGHRLAKYCEKFHIPFEYNAIAQKWETIKLEDLKLKEGEFVAVNSLFRFRNLLDETVAVHSPRDAVLKLIRKIKPDVFMPGILSGSYNAPFFVTRFREVLFHYSSLFDMCDTNLAREDPMRLMFEKEFYGREIMNVVACEGTERVERPESYKQWQARAMRAGFRQIPLEKDLVQKLKLLVENGYKTKEFDVDQDCNWLLQGWKGRIVYASSVWV
Links
Other
GRAS
family TFs
Other
Capsella grandiflora
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_02350
Beauveria bassiana
BBA_02350
N
CCM_03446
Cordyceps militaris
CCM_03446
N
CPUR_07239
Claviceps purpurea
CPUR_07239
N
e_gw1.2.1343.1
Nectria haematococca
e_gw1.2.1343.1
N
FFUJ_06166
Fusarium fujikuroi
FFUJ_06166
N
FGRRES_08646
Fusarium graminearum
FGRRES_08646
N
FOXG_03154
Fusarium oxysporum
FOXG_03154
N
FPSE_11569
Fusarium pseudograminearum
FPSE_11569
N
FVEG_02020
Fusarium verticillioides
FVEG_02020
N
MAC_00924
Metarhizium acridum
MAC_00924
N
MAJ_03821
Metarhizium majus
MAJ_03821
N
MAM_03208
Metarhizium album
MAM_03208
N
MBR_08316
Metarhizium brunneum
MBR_08316
N
MGU_03487
Metarhizium guizhouense
MGU_03487
N
NechaG36483
Fusarium solani
NechaG36483
N
OCS_00981
Ophiocordyceps sinensis
OCS_00981
N
TRIATDRAFT_293987
Trichoderma atroviride
TRIATDRAFT_293987
N
TRIREDRAFT_106048
Trichoderma reesei
TRIREDRAFT_106048
N
TRIVIDRAFT_212951
Trichoderma virens
TRIVIDRAFT_212951
N
VHEMI06982
Torrubiella hemipterigena
VHEMI06982
N
X797_003612
Metarhizium robertsii
X797_003612
N