CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10020171m.g
(
Capsella rubella
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Carubv10020171m.g
T202365_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10020171m
GRAS
152
504
LVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAEGLARRIYRIYPRDDDVALSDTLQIHFYESCPYLKFAHFTANQAILEAFAMADKVHVIDLGLNHGLQWPALIQALALRPNGPPDFRLTGIGYSLTELQEVGWKLGQLASTIGVNYEFKSIALNNLSDLKPEMLDIRSGSESVAVNSVFDLHRLLAHPGSIDKFLSTIRSIRPDIMTIVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGSPSQDRVMSELFLGRQILNLVACEGEDRVERHETLNQWRNRFGSGGFKPVNIGSNAYKQASMLLALHAGADGYSVDENEGCLLLGWQTRPLIATSAWS
Links
Other
GRAS
family TFs
Other
Capsella rubella
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_07300
Beauveria bassiana
BBA_07300
N
0.000
CSUB01_08112
Colletotrichum sublineola
CSUB01_08112
N
0.000
KUCA_T00003601001
Kuraishia capsulata
KUCA_T00003601001
N
0.000
LELG_03488
Lodderomyces elongisporus
LELG_03488
N
0.000
MAC_02193
Metarhizium acridum
MAC_02193
N
0.000
MAJ_11102
Metarhizium majus
MAJ_11102
N
0.000
MANI_018477
Metarhizium anisopliae
MANI_018477
N
0.000
MBR_09190
Metarhizium brunneum
MBR_09190
N
0.000
MGU_10142
Metarhizium guizhouense
MGU_10142
N
0.000
UV8b_4982
Ustilaginoidea virens
UV8b_4982
N
0.000
V499_06674
Pseudogymnoascus pannorum
V499_06674
N
0.000
X797_002868
Metarhizium robertsii
X797_002868
N
0.000