evm.TU.supercontig_116.43 (Carica papaya)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 evm.TU.supercontig_116.43 T202508_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RGL2
M02031_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Weirauch et al.(2014)
pTH8681 		0.709 0.709
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_116.43 GRAS 249 612

Links

Other GRAS family TFs
Other Carica papaya TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OLIG1 Canis familiaris ENSCAFG00000031953 I
OLIG2 Callithrix jacchus ENSCJAG00000009439 I
ENSCPOG00000020839 Cavia porcellus ENSCPOG00000020839 I
ENSCSAG00000018686 Chlorocebus sabaeus ENSCSAG00000018686 I
OLIG1 Dasypus novemcinctus ENSDNOG00000042196 I
OLIG1 Homo sapiens ENSG00000184221 D
ENSLAFG00000007964 Loxodonta africana ENSLAFG00000007964 I
OLIG1 Macaca mulatta ENSMMUG00000001558 I
OLIG1 Monodelphis domestica ENSMODG00000021070 I
Olig1 Mus musculus ENSMUSG00000046160 I
ENSOANG00000002423 Ornithorhynchus anatinus ENSOANG00000002423 I
OLIG1 Oryctolagus cuniculus ENSOCUG00000027389 I
OLIG1 Otolemur garnettii ENSOGAG00000033584 I
OLIG1 Ochotona princeps ENSOPRG00000007722 I
OLIG1 Pan troglodytes ENSPTRG00000031440 I
OLIG1 Pteropus vampyrus ENSPVAG00000001702 I
Olig1 Rattus norvegicus ENSRNOG00000028648 I
ENSSHAG00000004906 Sarcophilus harrisii ENSSHAG00000004906 I
OLIG1 Sus scrofa ENSSSCG00000012040 I
ENSSTOG00000027713 Ictidomys tridecemlineatus ENSSTOG00000027713 I
OLIG1 Vicugna pacos ENSVPAG00000005098 I
Pvit_10684 Pogona vitticeps Pvit_10684 I
olig1 Xenopus tropicalis XB-GENE-478472 I