CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
evm.TU.supercontig_49.157
(
Carica papaya
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
evm.TU.supercontig_49.157
T202527_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_49.157
GRAS
404
761
IIDQLFKAAELIETGNPVLAHGILARLNHQLSPVGKPFQRAACYFKEALQLLIHMNTANSPALSSYSLIFKIGAYKSFSEISPVVQFANFTCNQALLEAFEGFDKIHIIDFDIGYGGQWASLMQELVLRNGGAPSLKITAFASPSAHEELELGFTQENLKRFATEINMAFDIEILRLESLTPASWPLPLHVSEGEIIAVNLPIASFCNYPSSLPLVLRFIKHLPPKIMVTLDRGCDRTDVPFPHHIIHALQSYWGLLESLDAVNMNLDALQKIERFLVQPGIEKIVLGRHRCLERTPSWRSLFIQSGFSPLTFSNFTESQAECLVQRTPIRGFHIEKKQASLVLCWQRKELISASAWR
Links
Other
GRAS
family TFs
Other
Carica papaya
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_189549
Agaricus bisporus
AGABI2DRAFT_189549
N
GALMADRAFT_234509
Galerina marginata
GALMADRAFT_234509
N
GLOTRDRAFT_112996
Gloeophyllum trabeum
GLOTRDRAFT_112996
N
JAAARDRAFT_29177
Jaapia argillacea
JAAARDRAFT_29177
N
K443DRAFT_104849
Laccaria amethystina
K443DRAFT_104849
N
LACBIDRAFT_301338
Laccaria bicolor
LACBIDRAFT_301338
N
M404DRAFT_997406
Pisolithus tinctorius
M404DRAFT_997406
N
M413DRAFT_22286
Hebeloma cylindrosporum
M413DRAFT_22286
N
Moror_4800
Moniliophthora roreri
Moror_4800
N
PLEOSDRAFT_1075409
Pleurotus ostreatus
PLEOSDRAFT_1075409
N
SCHCODRAFT_84267
Schizophyllum commune
SCHCODRAFT_84267
N
SERLA73DRAFT_173993
Serpula lacrymans
SERLA73DRAFT_173993
N