CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene18499-v1.0-hybrid
(
Fragaria vesca
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
gene18499-v1.0-hybrid
T202569_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna18499.1-v1.0-hybrid
GRAS
162
533
LVHMLLACAEAVGCRDTRLAESLLTQIWASVSPFGDSLQRVSYCFAMGLKSRLSLLQNVNLNGTFNNDTMDVSMIAREEKLEAFQLLYQTTPYIAFGFMVANEAICQAAQGKESLHIIDLGMEHTLQWPSLLRTLASRPEGPPKKLRITGLVEDDNVFELEAGMRVLVEEASSLGIPMEFNMISEPVKPSLLTKENLDLREGEALCVNSIMHLHRYVRESRGSLKAILQALKKLSPSVLTLVEQDANHNGPFFLGRFLESLHFYSAIFDSLEVSLPRNSPQRTKIERLHFADEIRNIVAFEGLNRVERHERADQWRRQLGRAGFQVMGLKCTSQARMMLSVYGCDGYSLASEKGCLLLGWKGRPIMLAAAWQ
Links
Other
GRAS
family TFs
Other
Fragaria vesca
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TVAG_051900
Trichomonas vaginalis
TVAG_051900
N
TVAG_072810
Trichomonas vaginalis
TVAG_072810
N
TVAG_089030
Trichomonas vaginalis
TVAG_089030
N
TVAG_125900
Trichomonas vaginalis
TVAG_125900
N
TVAG_189350
Trichomonas vaginalis
TVAG_189350
N
TVAG_213050
Trichomonas vaginalis
TVAG_213050
N
TVAG_225500
Trichomonas vaginalis
TVAG_225500
N
TVAG_232920
Trichomonas vaginalis
TVAG_232920
N
TVAG_267240
Trichomonas vaginalis
TVAG_267240
N
TVAG_267720
Trichomonas vaginalis
TVAG_267720
N
TVAG_313450
Trichomonas vaginalis
TVAG_313450
N
TVAG_316440
Trichomonas vaginalis
TVAG_316440
N
TVAG_320900
Trichomonas vaginalis
TVAG_320900
N
TVAG_327420
Trichomonas vaginalis
TVAG_327420
N
TVAG_368380
Trichomonas vaginalis
TVAG_368380
N
TVAG_374420
Trichomonas vaginalis
TVAG_374420
N
TVAG_403490
Trichomonas vaginalis
TVAG_403490
N
TVAG_451680
Trichomonas vaginalis
TVAG_451680
N
TVAG_457930
Trichomonas vaginalis
TVAG_457930
N
TVAG_488290
Trichomonas vaginalis
TVAG_488290
N
TVAG_492630
Trichomonas vaginalis
TVAG_492630
N
TVAG_509260
Trichomonas vaginalis
TVAG_509260
N
TVAG_519610
Trichomonas vaginalis
TVAG_519610
N
TVAG_541710
Trichomonas vaginalis
TVAG_541710
N
TVAG_546520
Trichomonas vaginalis
TVAG_546520
N
TVAG_565880
Trichomonas vaginalis
TVAG_565880
N
TVAG_574420
Trichomonas vaginalis
TVAG_574420
N
TVAG_590230
Trichomonas vaginalis
TVAG_590230
N
TVAG_600430
Trichomonas vaginalis
TVAG_600430
N