CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene24339-v1.0-hybrid
(
Fragaria vesca
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
gene24339-v1.0-hybrid
T202577_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna24339.1-v1.0-hybrid
GRAS
75
436
LLGLLLQCAECVAMDNLHDASDLLPEISELSSPFGSSPERVGAYFAHALQTRVISSCLGTYSPLTTKTLTAAQSQRIFNALQSYNSISPLVKFSHFTANQAIFQALEGEDHVHVIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGSSTELLESTGRRLADFASSLGLPFEFHPLEGKIGSVAELSQLGIRSSEATVVHWMHHCLYDVTGSDLATLRSLSLLRPKLITVVEQDLSHSGSFLGRFVEALHYYSALFDALGDGLNADSLERHMVEQQLFGCEIRNILAVGGPKRTGEVKVERWGEELKRVGFRPVSLGGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQ
Links
Other
GRAS
family TFs
Other
Fragaria vesca
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_03703
Capronia coronata
A1O1_03703
N
A1O5_08031
Cladophialophora psammophila
A1O5_08031
N
A1O9_03872
Exophiala aquamarina
A1O9_03872
N
AB10636.1
Alternaria brassicicola
AB10636.1
N
ACRE_013750
Acremonium chrysogenum
ACRE_013750
I
AOL_s00076g272
Arthrobotrys oligospora
AOL_s00076g272
N
ARB_01321
Arthroderma benhamiae
ARB_01321
I
AUEXF2481DRAFT_24415
Aureobasidium subglaciale
AUEXF2481DRAFT_24415
I
BAUCODRAFT_243073
Baudoinia compniacensis
BAUCODRAFT_243073
N
BBA_01514
Beauveria bassiana
BBA_01514
I
Bcin04g01240
Botrytis cinerea
Bcin04g01240
I
Bcin07g01630
Botrytis cinerea
Bcin07g01630
N
BDDG_09744
Blastomyces dermatitidis
BDDG_09744
I
ACLA_070410
Aspergillus clavatus
CADACLAG00006808
N
AFUA_2G11460
Aspergillus fumigatus
CADAFUAG00004521
I
CADANGAG00001855
Aspergillus niger
CADANGAG00001855
N
CADAORAG00008529
Aspergillus oryzae
CADAORAG00008529
N
NFIA_086700
Neosartorya fischeri
CADNFIAG00008233
I
CCM_04341
Cordyceps militaris
CCM_04341
I
CERSUDRAFT_114532
Ceriporiopsis subvermispora
CERSUDRAFT_114532
I
CFIO01_12268
Colletotrichum fioriniae
CFIO01_12268
I
CGGC5_2102
Colletotrichum gloeosporioides
CGGC5_2102
I
CH063_01368
Colletotrichum higginsianum
CH063_01368
N
CIMG_08192
Coccidioides immitis
CIMG_08192
I
COCC4DRAFT_19355
Bipolaris maydis
COCC4DRAFT_19355
I
COCC4DRAFT_63629
Bipolaris maydis
COCC4DRAFT_63629
N
COCCADRAFT_32122
Bipolaris zeicola
COCCADRAFT_32122
I
COCCADRAFT_34097
Bipolaris zeicola
COCCADRAFT_34097
N
COCMIDRAFT_101691
Bipolaris oryzae
COCMIDRAFT_101691
N
COCMIDRAFT_24418
Bipolaris oryzae
COCMIDRAFT_24418
I
COCSADRAFT_170559
Bipolaris sorokiniana
COCSADRAFT_170559
N
COCSADRAFT_306311
Bipolaris sorokiniana
COCSADRAFT_306311
I
COCVIDRAFT_108667
Bipolaris victoriae
COCVIDRAFT_108667
N
COCVIDRAFT_12188
Bipolaris victoriae
COCVIDRAFT_12188
I
CPC735_022090
Coccidioides posadasii
CPC735_022090
I
CSUB01_08743
Colletotrichum sublineola
CSUB01_08743
I
DOTSEDRAFT_88360
Dothistroma septosporum
DOTSEDRAFT_88360
N
DRE_02202
Drechslerella stenobrocha
DRE_02202
I
estExt_fgenesh1_pg.C_40169
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_40169
I
estExt_fgenesh1_pm.C_chr_50216
Mycosphaerella graminicola
estExt_fgenesh1_pm.C_chr_50216
N
estExt_fgenesh1_pm.C_sca_18_chr2_1_00326
Nectria haematococca
estExt_fgenesh1_pm.C_sca_18_chr2_1_00326
I
estExt_Genewise1.C_120294
Neurospora discreta
estExt_Genewise1.C_120294
I
EURHEDRAFT_513477
Aspergillus ruber
EURHEDRAFT_513477
N
e_gw1.3.1267.1
Cryphonectria parasitica
e_gw1.3.1267.1
I
F503_05786
Ophiostoma piceae uamh
F503_05786
I
FFUJ_04988
Fusarium fujikuroi
FFUJ_04988
I
fgenesh1_pm.00168_#_452
Aspergillus carbonarius
fgenesh1_pm.00168_#_452
I
fgenesh1_pm.00866_#_274
Aspergillus carbonarius
fgenesh1_pm.00866_#_274
I
FGRRES_06160
Fusarium graminearum
FGRRES_06160
I
FOMPIDRAFT_1024907
Fomitopsis pinicola
FOMPIDRAFT_1024907
I
FOXG_08550
Fusarium oxysporum
FOXG_08550
I
FPSE_02512
Fusarium pseudograminearum
FPSE_02512
I
G647_09620
Cladophialophora carrionii
G647_09620
N
GALMADRAFT_249209
Galerina marginata
GALMADRAFT_249209
I
GLRG_02776
Colletotrichum graminicola
GLRG_02776
I
GMDG_07447
Pseudogymnoascus destructans
GMDG_07447
N
gw1.59.15.1
Mycosphaerella fijiensis
gw1.59.15.1
N
H072_1134
Dactylellina haptotyla
H072_1134
N
H101_07358
Trichophyton interdigitale
H101_07358
I
H102_03415
Trichophyton rubrum
H102_03415
I
H105_03436
Trichophyton soudanense
H105_03436
I
HCBG_04284
Histoplasma capsulatum
HCBG_04284
N
HMPREF1120_08148
Exophiala dermatitidis
HMPREF1120_08148
I
HMPREF1541_00939
Cyphellophora europaea
HMPREF1541_00939
N
JAAARDRAFT_136956
Jaapia argillacea
JAAARDRAFT_136956
I
LEMA_P057360.1
Leptosphaeria maculans
LEMA_P057360.1
N
LEMA_P120870.1
Leptosphaeria maculans
LEMA_P120870.1
I
M378DRAFT_197822
Amanita muscaria
M378DRAFT_197822
I
M413DRAFT_441943
Hebeloma cylindrosporum
M413DRAFT_441943
I
M437DRAFT_14692
Aureobasidium melanogenum
M437DRAFT_14692
I
M438DRAFT_323991
Aureobasidium pullulans
M438DRAFT_323991
I
MAC_00726
Metarhizium acridum
MAC_00726
N
MAJ_01716
Metarhizium majus
MAJ_01716
N
MAM_03911
Metarhizium album
MAM_03911
N
MANI_020691
Metarhizium anisopliae
MANI_020691
N
MBM_00253
Marssonina brunnea
MBM_00253
I
MBM_01678
Marssonina brunnea
MBM_01678
I
MBR_00349
Metarhizium brunneum
MBR_00349
N
MCYG_02230
Microsporum canis
MCYG_02230
I
MCYG_02230
Arthroderma otae
MCYG_02230
I
MGG_05153
Magnaporthe oryzae
MGG_05153
I
MGG_07131
Magnaporthe oryzae
MGG_07131
I
MGU_01192
Metarhizium guizhouense
MGU_01192
N
MGYG_02927
Microsporum gypseum
MGYG_02927
I
MPH_05611
Macrophomina phaseolina
MPH_05611
N
MYCFIDRAFT_216484
Pseudocercospora fijiensis
MYCFIDRAFT_216484
N
Mycgr3G100243
Zymoseptoria tritici
Mycgr3G100243
N
NCU05294
Neurospora crassa
NCU05294
D
NechaG103398
Fusarium solani
NechaG103398
I
NEUTE1DRAFT_121594
Neurospora tetrasperma
NEUTE1DRAFT_121594
I
OCS_01600
Ophiocordyceps sinensis
OCS_01600
I
OIDMADRAFT_152619
Oidiodendron maius
OIDMADRAFT_152619
N
PAAG_03678
Paracoccidioides sp lutzii
PAAG_03678
I
PABG_00737
Paracoccidioides brasiliensis
PABG_00737
I
Pc15g00340
Penicillium chrysogenum
Pc15g00340
N
PCH_Pc15g00340
Penicillium rubens
PCH_Pc15g00340
N
PDE_08558
Penicillium oxalicum
PDE_08558
I
PDIP_10950
Penicillium digitatum
PDIP_10950
N
PEX1_002010
Penicillium expansum
PEX1_002010
N
PFICI_05184
Pestalotiopsis fici
PFICI_05184
I
PITC_071780
Penicillium italicum
PITC_071780
N
PMAA_041870
Talaromyces marneffei
PMAA_041870
I
PMAA_041870
Penicillium marneffei
PMAA_041870
I
PMAA_048690
Talaromyces marneffei
PMAA_048690
N
PMAA_048690
Penicillium marneffei
PMAA_048690
N
PTRG_07169
Pyrenophora triticirepentis
PTRG_07169
I
PTRG_11285
Pyrenophora triticirepentis
PTRG_11285
N
PTT_11312
Pyrenophora teres
PTT_11312
N
PTT_16310
Pyrenophora teres
PTT_16310
I
PV04_00688
Capronia semiimmersa
PV04_00688
N
PV05_05867
Exophiala xenobiotica
PV05_05867
N
PV06_07091
Exophiala oligosperma
PV06_07091
N
PV08_00631
Exophiala spinifera
PV08_00631
N
PV09_03082
Verruconis gallopava
PV09_03082
N
PV11_00424
Exophiala sideris
PV11_00424
N
PVAR5_2500
Byssochlamys spectabilis
PVAR5_2500
I
PVAR5_3215
Byssochlamys spectabilis
PVAR5_3215
I
S40285_00977
Stachybotrys chlorohalonata
S40285_00977
I
S40288_06232
Stachybotrys chartarum
S40288_06232
I
SEPMUDRAFT_150864
Sphaerulina musiva
SEPMUDRAFT_150864
N
SETTUDRAFT_172422
Setosphaeria turcica
SETTUDRAFT_172422
N
SMAC_01696
Sordaria macrospora
SMAC_01696
I
SNOG_00909
Stagonospora nodorum
SNOG_00909
I
SNOG_13663
Stagonospora nodorum
SNOG_13663
N
SNOG_13663
Phaeosphaeria nodorum
SNOG_13663
N
SS1G_01353
Sclerotinia sclerotiorum
SS1G_01353
N
TEQG_05320
Trichophyton equinum
TEQG_05320
I
TESG_06426
Trichophyton tonsurans
TESG_06426
I
TRIATDRAFT_34316
Trichoderma atroviride
TRIATDRAFT_34316
I
TRIREDRAFT_55274
Trichoderma reesei
TRIREDRAFT_55274
I
TRIVIDRAFT_28488
Trichoderma virens
TRIVIDRAFT_28488
N
TRIVIDRAFT_55531
Trichoderma virens
TRIVIDRAFT_55531
I
TRV_07383
Trichophyton verrucosum
TRV_07383
I
TSTA_038740
Talaromyces stipitatus
TSTA_038740
I
TSTA_076120
Talaromyces stipitatus
TSTA_076120
I
TSTA_122850
Talaromyces stipitatus
TSTA_122850
I
U727_00433201101
Penicillium solitum
U727_00433201101
N
UCRNP2_3613
Neofusicoccum parvum
UCRNP2_3613
N
VDAG_08992
Verticillium dahliae
VDAG_08992
I
W97_02535
Coniosporium apollinis
W97_02535
I
W97_05295
Coniosporium apollinis
W97_05295
N
X797_005336
Metarhizium robertsii
X797_005336
N
Z517_04030
Fonsecaea pedrosoi
Z517_04030
N
Z518_08584
Rhinocladiella mackenziei
Z518_08584
N
Z519_07868
Cladophialophora bantiana
Z519_07868
N