CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene34381-v1.0-hybrid
(
Fragaria vesca
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
gene34381-v1.0-hybrid
T202597_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna34381.1-v1.0-hybrid
GRAS
38
287
ARFQWPALIHGLSRRPGGPPKLRITGVELTVSGCQPEETVQETGHRLANYCKRFNVPFEYYAIAKKWETLQLVDLKVQRNEVLAVNCLCRFKYLLDETVMVNSPRDTVLNLIRKLNPDIFVQSVVNGSHDAPFFVPRFREALFHFSAYFDLLDTNLPREDQIRLGFEKEFIGREVLNIVACEGTKRIARPETYKQWQIRNTRAGFRQLPLDYEVVNKIKDKVKMGYHPFFVVNEDGHWMLQGWKGRILLP
Links
Other
GRAS
family TFs
Other
Fragaria vesca
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm000719
Prunus mume
Pm000719
N
0.738
PRUPE_ppa003149mg
Prunus persica
PRUPE_ppa003149mg
N
0.742
SapurV1A.0040s0470
Salix purpurea
SapurV1A.0040s0470
N
0.710
SapurV1A.0041s0160
Salix purpurea
SapurV1A.0041s0160
N
0.702
SapurV1A.4599s0010
Salix purpurea
SapurV1A.4599s0010
N
0.710