CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.006G198300
(
Gossypium raimondii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Gorai.006G198300
T202633_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.006G198300.1
GRAS
241
610
SKQTIMEAASAIAEGKTDVANEILTRLAQDSNAKGNSEQRFVACMLLALKSRINSVENPPPVAELFSKEHAAATQLLYDLSPCFKLGFLAANLAILDATRDQPSCNKLHIIDFDIGKGRQYINLLHALSERGSGKPALVKITAIADNGGDERVKMVEDKLSEIAERFGVCMKFNVVASPKLIDLSRESLGCEPDEPLAINFAFNLYRMPDESVSVENQRDELLRRVKGLTPSVVTLVEHEMNTNTAPFTSRVGEASAYYGALFDSIESSVPREKSERVMVEEGLCRKIANSVSCEGRERVERCEVFGKWRARMSMAGFELKPLSESVAESMRARLNSGNRVNPGFTVKEENGGVCFGWMGRTLTVASAWR
Links
Other
GRAS
family TFs
Other
Gossypium raimondii
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000009025
Ailuropoda melanoleuca
ENSAMEG00000009025
I
ZNF354C
Canis familiaris
ENSCAFG00000029202
N
ENSCSAG00000008484
Chlorocebus sabaeus
ENSCSAG00000008484
I
ZNF354C
Equus caballus
ENSECAG00000023446
N
ZNF354C
Felis catus
ENSFCAG00000023699
N
ZNF354C
Gorilla gorilla
ENSGGOG00000014245
I
ZNF354C
Macaca mulatta
ENSMMUG00000002485
I
ENSMMUP00000003342
Macaca fascicularis
ENSMMUP00000003342
I
ENSMPUG00000000700
Mustela putorius furo
ENSMPUG00000000700
N
Zfp354c
Mus musculus
ENSMUSG00000044807
N
ENSOARG00000004045
Ovis aries
ENSOARG00000004045
N
ENSPANG00000002751
Papio anubis
ENSPANG00000002751
I
ZNF354C
Procavia capensis
ENSPCAG00000006966
I
ENSPPYG00000016117
Pongo abelii
ENSPPYG00000016117
I
ZNF354C
Pan troglodytes
ENSPTRG00000017613
I
Zfp354c
Rattus norvegicus
ENSRNOG00000029205
N
ZNF354C
Sus scrofa
ENSSSCG00000021640
N
ZNF354C
Tursiops truncatus
ENSTTRG00000011571
I