CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10040284.g
(
Linum usitatissimum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Lus10040284.g
T202785_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10040284
GRAS
390
761
LRTLLTLCAQAVAADDRRNANDLLKQIRDNAPPTGDGMQRLASIFADGLEARMAGSGTKIYKALITKATSAADVLKAYQLFLAACPFKKLSNYFSNKTIMNLAQRAKKLHIVDFGILYGFQWPCLIQRLSSMPGGPPKLRITGVDLPNPGFRPAERVEETGCRLANYARTFNVPFEFNAIAQKWDTIKIEDLKIEKDEVLVVNCMYRLRNLLDETVVVDCPRNIVLNLVRRMNPEVFILGIVNGSYSAPFFITRFREALFHFSTVFDMLETTVPRDMPERMLIERDIFGWEAMNVIACEGAERLERPETYKQCQIRAQRAGFSQLPLNREIFSTAKEKVKENYNKDFMIDEDGEWFLQGWKGRIVYALSSWK
Links
Other
GRAS
family TFs
Other
Linum usitatissimum
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMAM006920
Anopheles maculatus
AMAM006920
N
0.000
ASIM_0000354801
Anisakis simplex
ASIM_0000354801
N
0.000
ASIM_0000666601
Anisakis simplex
ASIM_0000666601
N
0.000
CGOC_0000144801
Cylicostephanus goldi
CGOC_0000144801
N
0.000
GPUH_0000237501
Gongylonema pulchrum
GPUH_0000237501
N
0.000
GPUH_0000554101
Gongylonema pulchrum
GPUH_0000554101
N
0.000
Hba_12714
Heterorhabditis bacteriophora
Hba_12714
N
0.000
HPBE_0002236801
Heligmosomoides bakeri
HPBE_0002236801
N
0.000
OFLC_0001253601
Onchocerca flexuosa
OFLC_0001253601
N
0.000
SVUK_0001794501
Strongylus vulgaris
SVUK_0001794501
N
0.000
TELCIR_14677
Teladorsagia circumcincta
TELCIR_14677
N
0.000