CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000950387
(
Malus domestica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
MDP0000950387
T202920_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000950387
GRAS
1
324
MRKVATYFAEALARRIYRIYPQDCLDSSYSDILEMHFYETCPYLKFAHFTANQAILEAFATASRVHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLAETIGVEFEFRGFVASSLADLTPSMLDIRPSEGEVVAVNSVFELHRXLARPGAVDKVLSSIKAMKPKIVTIVEQEANHNGPVFLDRFTEALHYYSNLFDSLEGSSGPSQDLVMSEVYLGRQICNVMACEXGDRVERHETLSQWRSRMDSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGSLMLGWHTRPLIATSAWQ
Links
Other
GRAS
family TFs
Other
Malus domestica
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI003006
Acyrthosiphon pisum
ACYPI003006
I
0.000
AGAP010201
Anopheles gambiae
AGAP010201
I
0.000
Alligator_sinensis_CCG004455.1
Alligator sinensis
Alligator_sinensis_CCG004455.1
I
0.000
BGIBMGA010353
Bombyx mori
BGIBMGA010353
I
0.000
CapteG45346
Capitella teleta
CapteG45346
I
0.000
CGI_10026909
Crassostrea gigas
CGI_10026909
I
0.000
Cmyd_10017689
Chelonia mydas
Cmyd_10017689
I
0.000
TFAP4
Anolis carolinensis
ENSACAG00000016352
I
0.000
ENSAMEG00000002016
Ailuropoda melanoleuca
ENSAMEG00000002016
I
0.000
ENSAPLG00000013446
Anas platyrhynchos
ENSAPLG00000013446
I
0.000
TFAP4
Bos taurus
ENSBTAG00000033174
I
0.000
TFAP4
Canis familiaris
ENSCAFG00000019231
I
0.000
TFAP4
Callithrix jacchus
ENSCJAG00000019756
I
0.000
TFAP4
Cavia porcellus
ENSCPOG00000004174
I
0.000
ENSCSAG00000009620
Chlorocebus sabaeus
ENSCSAG00000009620
I
0.000
ENSCSAVG00000000333
Ciona savignyi
ENSCSAVG00000000333
I
0.000
tfap4
Danio rerio
ENSDARG00000103923
I
0.000
TFAP4
Dasypus novemcinctus
ENSDNOG00000039193
I
0.000
Tfap4
Dipodomys ordii
ENSDORG00000004656
I
0.000
TFAP4
Equus caballus
ENSECAG00000022311
I
0.000
TFAP4
Erinaceus europaeus
ENSEEUG00000006004
I
0.000
TFAP4
Echinops telfairi
ENSETEG00000008634
I
0.000
ENSFALG00000004331
Ficedula albicollis
ENSFALG00000004331
I
0.000
TFAP4
Felis catus
ENSFCAG00000011227
I
0.000
TFAP4
Homo sapiens
ENSG00000090447
D
0.000
tfap4
Gasterosteus aculeatus
ENSGACG00000011329
I
0.000
tfap4
Gasterosteus aculeatus
ENSGACG00000018768
I
0.000
TFAP4
Gorilla gorilla
ENSGGOG00000000451
I
0.000
ENSGMOG00000014930
Gadus morhua
ENSGMOG00000014930
I
0.000
ENSGMOG00000015232
Gadus morhua
ENSGMOG00000015232
I
0.000
ENSLACG00000000328
Latimeria chalumnae
ENSLACG00000000328
I
0.000
TFAP4
Loxodonta africana
ENSLAFG00000022341
I
0.000
ENSLOCG00000002626
Lepisosteus oculatus
ENSLOCG00000002626
I
0.000
ENSMEUG00000000888
Macropus eugenii
ENSMEUG00000000888
I
0.000
TFAP4
Meleagris gallopavo
ENSMGAG00000009411
I
0.000
TFAP4
Myotis lucifugus
ENSMLUG00000005725
I
0.000
TFAP4
Monodelphis domestica
ENSMODG00000016377
I
0.000
ENSMPUG00000015023
Mustela putorius furo
ENSMPUG00000015023
I
0.000
Tfap4
Mus musculus
ENSMUSG00000005718
D
0.000
ENSNLEG00000009797
Nomascus leucogenys
ENSNLEG00000009797
I
0.000
TFAP4
Ornithorhynchus anatinus
ENSOANG00000019858
I
0.000
ENSOARG00000003120
Ovis aries
ENSOARG00000003120
I
0.000
TFAP4
Oryctolagus cuniculus
ENSOCUG00000024550
I
0.000
TFAP4
Otolemur garnettii
ENSOGAG00000008955
I
0.000
ENSONIG00000005196
Oreochromis niloticus
ENSONIG00000005196
I
0.000
ENSONIG00000016338
Oreochromis niloticus
ENSONIG00000016338
I
0.000
ENSOPRG00000001061
Ochotona princeps
ENSOPRG00000001061
I
0.000
tfap4
Oryzias latipes
ENSORLG00000008286
I
0.000
tfap4
Oryzias latipes
ENSORLG00000015050
I
0.000
ENSP00000204517
Macaca fascicularis
ENSP00000204517
I
0.000
ENSP00000204517-D1
Bos grunniens
ENSP00000204517-D1
I
0.000
ENSPANG00000010499
Papio anubis
ENSPANG00000010499
I
0.000
TFAP4
Procavia capensis
ENSPCAG00000011134
I
0.000
ENSPFOG00000000836
Poecilia formosa
ENSPFOG00000000836
I
0.000
ENSPFOG00000011355
Poecilia formosa
ENSPFOG00000011355
I
0.000
ENSPPYG00000007054
Pongo abelii
ENSPPYG00000007054
I
0.000
ENSPSIG00000009002
Pelodiscus sinensis
ENSPSIG00000009002
I
0.000
TFAP4
Pan troglodytes
ENSPTRG00000007713
I
0.000
ENSPVAG00000005418
Pteropus vampyrus
ENSPVAG00000005418
I
0.000
Tfap4
Rattus norvegicus
ENSRNOG00000005227
I
0.000
ENSSHAG00000011487
Sarcophilus harrisii
ENSSHAG00000011487
I
0.000
ENSSTOG00000028040
Ictidomys tridecemlineatus
ENSSTOG00000028040
I
0.000
TFAP4
Tupaia belangeri
ENSTBEG00000014089
I
0.000
tfap4
Tetraodon nigroviridis
ENSTNIG00000002015
I
0.000
tfap4
Tetraodon nigroviridis
ENSTNIG00000009740
I
0.000
tfap4
Tetraodon nigroviridis
ENSTNIG00000014095
I
0.000
tfap4
Takifugu rubripes
ENSTRUG00000006111
I
0.000
tfap4
Takifugu rubripes
ENSTRUG00000013344
I
0.000
TFAP4
Tursiops truncatus
ENSTTRG00000002710
I
0.000
TFAP4
Vicugna pacos
ENSVPAG00000008001
I
0.000
ENSXMAG00000004632
Xiphophorus maculatus
ENSXMAG00000004632
I
0.000
ENSXMAG00000011968
Xiphophorus maculatus
ENSXMAG00000011968
I
0.000
estExt_fgenesh2_pg.C_3260041
Branchiostoma floridae
estExt_fgenesh2_pg.C_3260041
I
0.000
crp
Drosophila melanogaster
FBgn0001994
D
0.000
GA20511
Drosophila pseudoobscura
FBgn0080505
I
0.000
GF21721
Drosophila ananassae
FBgn0098721
I
0.000
GG24179
Drosophila erecta
FBgn0116312
I
0.000
GH10096
Drosophila grimshawi
FBgn0117577
I
0.000
GI14377
Drosophila mojavensis
FBgn0137129
I
0.000
GL14101
Drosophila persimilis
FBgn0151706
I
0.000
GM17917
Drosophila sechellia
FBgn0172824
I
0.000
GD21926
Drosophila simulans
FBgn0193342
I
0.000
GJ16254
Drosophila virilis
FBgn0203439
I
0.000
GK24289
Drosophila willistoni
FBgn0226250
I
0.000
GE19372
Drosophila yakuba
FBgn0236717
I
0.000
fgenesh2_pg.scaffold_326000054
Branchiostoma floridae
fgenesh2_pg.scaffold_326000054
I
0.000
GB48999
Apis mellifera
GB48999
I
0.000
HMEL008759
Heliconius melpomene
HMEL008759
I
0.000
KGM_15765
Danaus plexippus
KGM_15765
I
0.000
L798_07621
Zootermopsis nevadensis
L798_07621
I
0.000
LLOJ009485
Lutzomyia longipalpis
LLOJ009485
I
0.000
MDOA012071
Musca domestica
MDOA012071
I
0.000
Myotis_brandtii_TFAP4_10028039
Myotis brandtii
Myotis_brandtii_TFAP4_10028039
I
0.000
Ogr05167
Ophisaurus gracilis
Ogr05167
I
0.000
Pvit_18996
Pogona vitticeps
Pvit_18996
I
0.000
Sakowv30040946m.g
Saccoglossus kowalevskii
Sakowv30040946m.g
I
0.000
SPU_003179
Strongylocentrotus purpuratus
SPU_003179
I
0.000
TCLT_0000678201
Thelazia callipaeda
TCLT_0000678201
I
0.000
tetur30g00270
Tetranychus urticae
tetur30g00270
I
0.000
tfap4
Xenopus tropicalis
XB-GENE-999265
I
0.000