CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g005237m.g
(
Citrus sinensis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
orange1.1g005237m.g
T202923_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g005237m
GRAS
347
705
VIDQIFKAAELIEMGNPVLAQGILARLNHQLSPVVKPFQRAAFYVKEALQLLLHMNMNTPSAAMSGYNIIFKISAYKSFSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVFRSEGPPSLKITAFTSSSTHDEFELGFTQENLKHFASEINIPFELEILSLETLISASWPLPLQGLENDVTAVNLPIGVFSNYPATFPLVLRFVKQLQPKIVVSLDRSCDRPDFPFAHHMVHALQSYSGLLESLDSVNVNLDALQKIERFLVYPCIEKIVLGRHRSPERLPPWRSLFMQSGFAPLTFSNFAESQADCLVQRTPVRGFHVEKRQSSLVLCWQRKELISATAWR
Links
Other
GRAS
family TFs
Other
Citrus sinensis
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000014429
Astyanax mexicanus
ENSAMXG00000014429
N
ENSCPOG00000024138
Cavia porcellus
ENSCPOG00000024138
I
hes2.1
Danio rerio
ENSDARG00000074897
N
hes2.2
Gasterosteus aculeatus
ENSGACG00000006470
N
ENSGMOG00000015330
Gadus morhua
ENSGMOG00000015330
N
ENSONIG00000002077
Oreochromis niloticus
ENSONIG00000002077
N
hes2.2
Oryzias latipes
ENSORLG00000004275
N
ENSPFOG00000011221
Poecilia formosa
ENSPFOG00000011221
N
HES2
Tetraodon nigroviridis
ENSTNIG00000011986
N
HES2
Takifugu rubripes
ENSTRUG00000000980
N
HES2
Takifugu rubripes
ENSTRUG00000015206
N
ENSXMAG00000018649
Xiphophorus maculatus
ENSXMAG00000018649
N