CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g008559m.g
(
Citrus sinensis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
orange1.1g008559m.g
T202930_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g008559m
GRAS
170
553
AEQLLNPCAAAITAGNLTRVQHLLYVLHELASPTGDANHRLAAHGLRALTHHLSSLSSSSTTTTSTGPLTFSSTEPRFFQKSLLNFYDKSPWFAFPNNIANSSILQILAQDRHNQVQNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLVRLTIIAPTAENDQNAETPFSVGPPGDNYSLQLLGFAKSMNINLQINRLESHPLQDLSSQMVSTSPEETLIVCTQFRLHHLNHSTPDERTEFLRVLRSLEPKGVILSENNMDCSCGNCGDFATGFARRVEYLWRFLDSTSAAFKGRESEERRVMEGEAAKALTNRAEMNEGKDKWCDRMRGVGFVGDVFGEDAIDGGRALLRKYDNSWETRVEERDGCIELWWKGQPVSFCSLWK
Links
Other
GRAS
family TFs
Other
Citrus sinensis
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL018262
Aedes aegypti
AAEL018262
N
AATE008154
Anopheles atroparvus
AATE008154
N
ACYPI49735
Acyrthosiphon pisum
ACYPI49735
N
ADAC002603
Anopheles darlingi
ADAC002603
N
AFAF001554
Anopheles farauti
AFAF001554
N
AFUN011959
Anopheles funestus
AFUN011959
N
AGAP000587
Anopheles gambiae
AGAP000587
N
AMAM002767
Anopheles maculatus
AMAM002767
N
AMEC005010
Anopheles melas
AMEC005010
N
AMEM010607
Anopheles merus
AMEM010607
N
ASIS014786
Anopheles sinensis
ASIS014786
N
CPIJ010171
Culex quinquefasciatus
CPIJ010171
N
CpipJ_CPIJ010171
Culex pipiens
CpipJ_CPIJ010171
N
GB50426
Apis mellifera
GB50426
N
PPAI003324
Phlebotomus papatasi
PPAI003324
N