CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g039114m.g
(
Citrus sinensis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
orange1.1g039114m.g
T202944_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g039114m
GRAS
254
625
LSSLLTQCAQAAASNDQRVAIELSKQIRQHSSPDGDGTQRLAHYFANGLEARLSGTRTPYFSPAFISKTSVADVLKAYIVYISASPFRKASNFLTNRMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVHGVANGTYNSPFFVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYEREVFGRHAMNVLACEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLRRVKKMVKMDYHKDFDVDENGQWMLQGWKGKILYALSFWK
Links
Other
GRAS
family TFs
Other
Citrus sinensis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cmyd_10013605
Chelonia mydas
Cmyd_10013605
I
ENSLACG00000018283
Latimeria chalumnae
ENSLACG00000018283
N
ENSMEUG00000011159
Macropus eugenii
ENSMEUG00000011159
I
MESP1
Monodelphis domestica
ENSMODG00000019538
I
MESP2
Monodelphis domestica
ENSMODG00000024701
I
ENSSHAG00000013251
Sarcophilus harrisii
ENSSHAG00000013251
I
mespb.S
Xenopus laevis
XB-GENE-17337060
N
mespb
Xenopus tropicalis
XB-GENE-970939
N