orange1.1g040563m.g (Citrus sinensis)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 orange1.1g040563m.g T202946_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g040563m GRAS 210 305

Links

Other GRAS family TFs
Other Citrus sinensis TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_005_00404 Aquilegia coerulea Aquca_005_00404 N 0.833
BGIOSGA025902 Oryza indica BGIOSGA025902 N 0.708
BRADI1G25370 Brachypodium distachyon BRADI1G25370 N 0.708
cassava24578.valid.m1 Manihot esculenta cassava24578.valid.m1 N 0.833
Ca_06943 Cicer arietinum Ca_06943 N 0.781
Ciclev10007843m.g Citrus clementina Ciclev10007843m.g N 1.000
Cucsa.053270 Cucumis sativus Cucsa.053270 N 0.823
Eucgr.F03414 Eucalyptus grandis Eucgr.F03414 N 0.833
GLYMA06G41500 Glycine max GLYMA06G41500 N 0.833
GLYMA12G16750 Glycine max GLYMA12G16750 N 0.833
GLYMA12G34420 Glycine max GLYMA12G34420 N 0.750
GLYMA13G36120 Glycine max GLYMA13G36120 N 0.760
Gorai.002G080600 Gossypium raimondii Gorai.002G080600 N 0.833
Gorai.009G427800 Gossypium raimondii Gorai.009G427800 N 0.802
Gorai.013G164700 Gossypium raimondii Gorai.013G164700 N 0.844
GRMZM5G821439 Zea mays GRMZM5G821439 N 0.708
GSMUA_Achr6G24310_001 Musa acuminata GSMUA_Achr6G24310_001 N 0.719
LjSGA_032523.1 Lotus japonicus LjSGA_032523.1 N 0.781
Lus10035840.g Linum usitatissimum Lus10035840.g N 0.802
Lus10036623.g Linum usitatissimum Lus10036623.g N 0.771
MDP0000205622 Malus domestica MDP0000205622 N 0.812
mgf007614m Mimulus guttatus mgf007614m N 0.750
MLOC_37712 Hordeum vulgare MLOC_37712 N 0.708
MTR_2g082090 Medicago truncatula MTR_2g082090 N 0.750
OGLUM07G17420 Oryza glumaepatula OGLUM07G17420 N 0.708
OLONG_024541 Oryza longistaminata OLONG_024541 N 0.708
ONIVA07G16090 Oryza nivara ONIVA07G16090 N 0.708
ORUFI07G18480 Oryza rufipogon ORUFI07G18480 N 0.708
CIGR1 Oryza sativa OS07G0545800 N 0.708
Pavir.Bb02923 Panicum virgatum Pavir.Bb02923 N 0.708
Pavir.J35699 Panicum virgatum Pavir.J35699 N 0.708
PGSC0003DMG400019232 Solanum tuberosum PGSC0003DMG400019232 N 0.812
PGSC0003DMG400021802 Solanum tuberosum PGSC0003DMG400021802 N 0.740
PK07026.1 Cannabis sativa PK07026.1 N 0.812
Pm029452 Prunus mume Pm029452 N 0.875
POPTR_0001s44090 Populus trichocarpa POPTR_0001s44090 N 0.812
POPTR_0011s13460 Populus trichocarpa POPTR_0011s13460 N 0.854
PRUPE_ppa003323mg Prunus persica PRUPE_ppa003323mg N 0.865
SapurV1A.0327s0070 Salix purpurea SapurV1A.0327s0070 N 0.823
SapurV1A.0664s0120 Salix purpurea SapurV1A.0664s0120 N 0.865
Si029156m.g Setaria italica Si029156m.g N 0.708
Solyc07g063940.1 Solanum lycopersicum Solyc07g063940.1 N 0.802
Solyc12g005340.1 Solanum lycopersicum Solyc12g005340.1 N 0.740
TCM_031132 Theobroma cacao TCM_031132 N 0.875
VIT_19s0014g04940 Vitis vinifera VIT_19s0014g04940 N 0.823